| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1515 |
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| Symbol | |
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| ID | 4038318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1636839 |
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| End bp | 1637846 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976899 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_583667 |
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| Protein GI | 94310457 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0102249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000848331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTATTC GCATCGGAAT CAACGGCTTC GGTCGCATCG GCCGCATGGT GTTTCGCGCC
GCCGTGCAGG ACTTCAAGAA CGACATCGAG GTGGTCGCGA TCAACGACCT GCTCGAACCC
GACTATCTCG CGTACATGCT GCGGTACGAC AGCGTGCACG GCCGCTTCAA GGGCGAAGTG
GTCGTCGATG GCGGCACGCT GGTCGTCAAC GGCCGCAAGA TCCGGCTCAC CGCGGTAAAG
GATCCCGCCG CGCTCGCCTG GGGCGATGTC GGCGTCGACG TGGTCGTCGA GTCGACGGGC
CTGTTCCTGA CGCACGACAC CTGCCAGAAG CACCTCGACG CTGGCGCCAG GAAGGTGATC
CAGAGCGCAC CCAGCAAGGA CGACACGCCG ATGTTCGTCT ATGGCGTCAA CCACACCCAG
TACGCCGGTG AGAAGATCGT CAGCAACGCG AGCTGCACCA CGAACTGCCT GGCGCCGGTG
GCCAAGGTGC TCAACGACAG TTTCGGCATC AAGCGCGGCA TGATGACCAC CGTGCACGCC
GCCACCGCCA CGCAGAAGAC CGTGGACGGC CCGAGCAACA AGGACTGGCG CGGCGGCCGC
GGCATCCTCG AGAACATCAT CCCCTCGTCC ACCGGCGCCG CCAAGGCGAT GGGCCGGGTG
ATCCCGGCGC TGAACAACAA GCTCACCGGC ATGGCGCTTC GCGTGCCGAC CAGCGATGTG
TCGGTGGTCG ACCTGACCGT CGAACTCGCC CAGGAGACGA GCTACGAAAA GATCTGCGCG
GCGATGAAGG CGGCGAGCCA GGGCGCCATG AAAGGCGTGC TCGGGTACAC GCAGGACAAG
GTGGTTTCGA CCGACTTCCG CGGCGAGGCC TGCACCGCGG TGTTCGACGC CGAGGCCGGC
ATTATGCTCG ACTCGACCTT CGTCAAGGTG GTGGCCTGGT ACGACAACGA ATGGGGCTAC
TCGAGCAAGG TGCTCGAGAT GGTGCGCGTG ATGGGAGCGT CGCGGTGA
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| Protein sequence | MTIRIGINGF GRIGRMVFRA AVQDFKNDIE VVAINDLLEP DYLAYMLRYD SVHGRFKGEV
VVDGGTLVVN GRKIRLTAVK DPAALAWGDV GVDVVVESTG LFLTHDTCQK HLDAGARKVI
QSAPSKDDTP MFVYGVNHTQ YAGEKIVSNA SCTTNCLAPV AKVLNDSFGI KRGMMTTVHA
ATATQKTVDG PSNKDWRGGR GILENIIPSS TGAAKAMGRV IPALNNKLTG MALRVPTSDV
SVVDLTVELA QETSYEKICA AMKAASQGAM KGVLGYTQDK VVSTDFRGEA CTAVFDAEAG
IMLDSTFVKV VAWYDNEWGY SSKVLEMVRV MGASR
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