Gene Rmet_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1498 
Symbol 
ID4038301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1616689 
End bp1619046 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content60% 
IMG OID637976882 
Productvon Willebrand factor, type A 
Protein accessionYP_583650 
Protein GI94310440 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4548] Nitric oxide reductase activation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0704487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0338885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCA ATCTTGCTGA TTATGCCGAA TTGCTGGAGG ACTTGTCGCC GCACAGCCAG 
AATGCGTTGC AGGCCAATTG GCACGAAGCG ACCAAGGTGT TCTCGCCGCG TGGTCTGGAC
AACTACCTGA AGGGTGCGGC CGCCATTCGC GGACTCGGCA AGGGTGATTC GCTGGTGGAA
ACCTGGATCG AGAAAGCGCC GATGGTCGCC AAGGAGGTCG GCGAGGACGT TGTCGGCGAC
CTGGCTACTG CCTCCCTCGA ACTGGCCTCG CGAACCTCGG GGACGGTGAT CGAGCTGCTG
CTCGCCACTT CGGCCATCGC CGCCAATCGG CTGGGTGATG CCGAACTTTT CATCAAGTAC
CTGCAGTTCA TCAATACCCT GATCGCGCAA GCGCCGCGTG GCGTGCGGCC GATGCTGGAC
AAGCTGGAAG TCCTGTTCCA GCACCTCACC CTCGGTGGCC TGCGCCGTTG GGCGCTCTGG
GGCGCCCATG CACACCGCAC CAACTACGAA GAACAGATCC GCTATTTCAG CCTTGATTCC
AAGGAGTCGA TGGCGATGCT GCAGAAGGAG CGCAAGGGCA CCCTGCTGGT AGATGTGCAG
CGCCGCATCA ACATGTATCT GCGCGCACTG TGGGCCCGCG ACTTCTTCAT GCGCCCCACG
TCAGGCGACT TCGAGACCCG CGAAGGCTAC CGCCCTTACA TCGAGGACTA CCTGCTGCAC
GTGCCGGATG CGTTCGACGA TTTCACGGTC GAAGGTCAGG AGCCAGTGTC CGGTCTGGAG
CTATATCGCG CCACGGCCGC CCATTGCGCC GCCCACGTGG TCGAGACGAA GCTGCCTATT
TCCGCCGAGG CGCTCAATCC CATGCAGATC GCGGTGATCA GCGTCATCGA GGATGCGCGC
GTGGAGACTC TCTCCATCCG GCGCTTTCCC GGCCTCAAGC AACTCTGGAG CAAGCTGCAC
ACGGCCACGC CCGAGATGAA TGGCAGCATG GGCGATTATC TCAACCGTCT TGCACGCGCC
CTGCTTGATG AGTCATACAA GGACAAGGAC CCGTGGATCG TCGAGGCCCG TGCGCTGTTC
GCGCTCGCGC AGGAGAAGCT CGATAGCAAC CTGACTTCAT GGGATATTGG CGTCCAGCTT
GCGCACAGCT TCGGCCAGAA ACGGATTCCG TTCAATCCAC GTACCGATTT GCTCACCGCC
CCCTACCGCG ACGACAACCG CTACTTCTGG GAGTTCGAGG AATTCGATTT CAACAAGGCA
GCCAGTGCCG GCTACGAGTC CATCAAACAG GTGCGCAAGT ACGTCAGCGT GATGGAAATG
GCCAACGAGA TCGATGTCGA GACGGCCGGC GACGATGCCG AGGAAATCTG GGTGCTCGGC
ACCGAGTTGT TCCCGTATGA AAACATCGGT GACGAGAGTG GCGGCAAGAG CTTCAACGAA
CTTGAAGGCA AGGAGCCGGT CTCCGACCCC TTCCATTATT CCGAATGGGA TTACCAGATC
CAGTTGGAGC GCCCGGCCTG GGCAACCGTG CTGGAAAAGC GTGCCAAGGC CGGCGACCTG
CAGATCATCG AGGCGATTAC CGCACAGTAC AAGCGCGAAA TCCATCGCAT GAAATTCCTG
CTCGACGCCA TGCAGCCGCA GGGTGTGCAG CGCATCCGCC GCCTCGAGGA CGGCGACGAG
ATCGACATCA ACGCAGCGAT CTCCAGCCTT ACCGACATCC GCCTCGGCAA CCAGCCCGAT
CCACGCATCA TGATGCGTAG TGTGCGCAAG ACCCGCGACT TTTCGATCCT GGTGTTGCTC
GATCTGTCGG AATCGACCAA CGAAAAAGTG CAGGACCAGG AATATTCGGT GCGCGAGCTC
ACCCAGCAGG CCTGCGTGCT GCTGGCCGAC GCCATAAACA AGGTCGGCGA CCCCTTTGCC
ATCCACGGCT TTTGTTCGGA CGGACGCCAC GATGTCGAGT ACTACCGGTT CAAGGACTTC
GACCAGCATT GGGACGAGAC ACCCAAGTCC CGGCTCGCCG GGATGACCGG GCAGCTGTCT
ACCCGGATGG GTGCAGCGAT TCGACATGCC GGCCATCATT TGCAACTGCA GCGTTCGGCC
AAGAAACTCC TGATCGTCAT TACCGACGGC GAACCCGCCG ACGTGGATGT GCGCGACCCG
CAATACTTGC GCTACGACAC CAAGAAGGCT GTGGAGGAGG TGGCAAAACT TGGTGTCACC
ACCTACTGCA TGAGCCTGGA CCCACGCGCT GATAATTACG TCTCACGAAT TTTTGGCCAG
AAGAACTACA TGGTGGTGGA TCATGTCCAG CGCCTGCCCG AGAAACTGCC GCTGCTGTAT
GCCGGCCTTA CCCGATAG
 
Protein sequence
MSFNLADYAE LLEDLSPHSQ NALQANWHEA TKVFSPRGLD NYLKGAAAIR GLGKGDSLVE 
TWIEKAPMVA KEVGEDVVGD LATASLELAS RTSGTVIELL LATSAIAANR LGDAELFIKY
LQFINTLIAQ APRGVRPMLD KLEVLFQHLT LGGLRRWALW GAHAHRTNYE EQIRYFSLDS
KESMAMLQKE RKGTLLVDVQ RRINMYLRAL WARDFFMRPT SGDFETREGY RPYIEDYLLH
VPDAFDDFTV EGQEPVSGLE LYRATAAHCA AHVVETKLPI SAEALNPMQI AVISVIEDAR
VETLSIRRFP GLKQLWSKLH TATPEMNGSM GDYLNRLARA LLDESYKDKD PWIVEARALF
ALAQEKLDSN LTSWDIGVQL AHSFGQKRIP FNPRTDLLTA PYRDDNRYFW EFEEFDFNKA
ASAGYESIKQ VRKYVSVMEM ANEIDVETAG DDAEEIWVLG TELFPYENIG DESGGKSFNE
LEGKEPVSDP FHYSEWDYQI QLERPAWATV LEKRAKAGDL QIIEAITAQY KREIHRMKFL
LDAMQPQGVQ RIRRLEDGDE IDINAAISSL TDIRLGNQPD PRIMMRSVRK TRDFSILVLL
DLSESTNEKV QDQEYSVREL TQQACVLLAD AINKVGDPFA IHGFCSDGRH DVEYYRFKDF
DQHWDETPKS RLAGMTGQLS TRMGAAIRHA GHHLQLQRSA KKLLIVITDG EPADVDVRDP
QYLRYDTKKA VEEVAKLGVT TYCMSLDPRA DNYVSRIFGQ KNYMVVDHVQ RLPEKLPLLY
AGLTR