| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1485 |
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| Symbol | |
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| ID | 4038288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1604819 |
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| End bp | 1605688 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976869 |
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| Product | putative replication initiator and transcription repressor protein |
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| Protein accession | YP_583637 |
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| Protein GI | 94310427 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.158204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCG CCATGTCCAG CCCTGCGCTG CCATCCCGGC AGCGGCCGTT GCAGGAGCGC
GAACAGCTCG ACCTGTTCCG CGCCTTGCCC GGCGACATGG CGCCGCGCGA CAGCCAGGAC
TTGATGGCCT ATCCGTTCTT CTCGCTCGGC AAGTCCAAGC GGGTCAAGCC CATCGACTTC
CGCGCGGGCA ACGTCACGAT CCGCGTGGAA GGCACACAGG AGCACGGCAT CGCCACGATT
TGGGATGCGG ACGTGCTGAT ATGGGCGGCC TCGCAGATCG TGGAGGCGAA GGACGCAGGC
TTGCGCCCAT CGCGGCTGAT GCGCGCCACG CCCTACGAGA TCCTGCGCTT CATCGGGCGC
GGCAAGTCGC TGCGCGACTA CCAGCGCCTC AAGGCCGCAC TCGACCGGCT GCAATCGACC
ACGGTGGCCA CGTCCATCCG CGAGACGACC GGGCGGCGCC TGCACCGTTT CTCATGGATC
AACGAATGGA AGGAACTGGC CGATGCCAGC GGCACGCCGC TGGGCATCGA GCTGATCCTG
CCGGACTGGT TCTATGCGGG CGTGCTCGAC GCGGCCCTGG TGCTGACCAT CGACCCGGCA
TATTTCCGGC TGACTGGCGG CATCGAGCGG TGGCTGTACC GGCTGGTGCG CAAGCACGGC
GGCAAGCAGG CATACGGCTG GCAGTTCGAC TTTCGCTACC TGCACCAGAA ATCGGGCAGC
ACCGCCAAGC CCTACGAGTT CGCTTGCGAC CTGCGCGCGC TGGTCGCGCG GCAGTCGCTG
CCCGGCTACG TCCTGGGCAT CGAGCGGATG CCGGACAGCG GCATGGAGCT GCTGACGTTC
CGGCCCGTGC CGCATACGGC ACGGGGATAA
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| Protein sequence | MAFAMSSPAL PSRQRPLQER EQLDLFRALP GDMAPRDSQD LMAYPFFSLG KSKRVKPIDF
RAGNVTIRVE GTQEHGIATI WDADVLIWAA SQIVEAKDAG LRPSRLMRAT PYEILRFIGR
GKSLRDYQRL KAALDRLQST TVATSIRETT GRRLHRFSWI NEWKELADAS GTPLGIELIL
PDWFYAGVLD AALVLTIDPA YFRLTGGIER WLYRLVRKHG GKQAYGWQFD FRYLHQKSGS
TAKPYEFACD LRALVARQSL PGYVLGIERM PDSGMELLTF RPVPHTARG
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