Gene Rmet_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1479 
Symbol 
ID4038282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1599888 
End bp1600910 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content52% 
IMG OID637976863 
Producthypothetical protein 
Protein accessionYP_583631 
Protein GI94310421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.206358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.888427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATC TAATTATGCC GTGGGAACAC ATTGCACCCG GCTACCATCG CGGCACGATT 
CTTTTGGGCA ATGGGGCGAG CATCGCTGTT TCATCCAGCT TTGGCTATGG CTCGTTGTTA
GATCACGCCC AGCAAGCCGG TTTACTTGCA GATGATGTGC AGCAACTTTT TCGCTCTTTC
GGCACATCCG ATTTCGAGCT AATCCTGCGG CTGGTCTGGC AAGCGTCCAA CGTCAACAGG
TCGCTACAGA TACCGGATGA TCGAACGCAT CAAGCCTATC TGAATGTCAG AGAGTGTCTG
ATTCAGGCCG TTCGCGGCGT GCATCCCGCA TACGACCTAG TGAGTGGTCA CCTGCCCAGC
ATGTATCAAT TCCTCAAAGG GTTCGATACG GTTCTATCGT TGAACTATGA CTTGCTGGTC
TACTGGACGA TGACTTATGG ACTCAACGTT CAGGACGATC ACGTATTCAA GGATTGCTTC
GTTTGGAACG GCATGTTCGA CGATGCCTGG GGAAGATTTC GCGAACCTTT AAGGGAGCGA
ACGAACACTT TGGTGTTCTA TCCGCACGGA AGCTTGGCTC TGTGCCGAAA TGTGGTGGAG
CAGGAGTTCA AGATTCACAA TGCCGGCGAA GGTTTGCTGG AGGCAATCCT TGCGGAGTGG
CGCAGCGAGC GAGTTGTGCC CCTCTTTGTC AGCGAAGGAA CGATGTCGCA GAAGGTGTCC
TCTATCCAGA ATAGCTACTA CCTTTCTACA GTGTATCGTG AGGTGCTCAC TTCGCAGCGG
TTTACATTGA CACTATTTGG CTGGGGACTA GGAGAGCACG ACCGACATTT GTTGCGACGG
ATGCGTGGAA CCGGCATCCA GCGAGTGGCA GTCTCTGTTT TTCGTGGCGA TCAGGTCTAT
TGCAACTATG CGTACCAAGT CATTCAGGAT GATTTAGGGC CTGTCCATGT GGATTTTTTT
GATAGTGAAA GTCCTGGATG CTGGATTCAT GCAGTGCCAC CGGCACTGCC AGTATTTGGC
TAA
 
Protein sequence
MPYLIMPWEH IAPGYHRGTI LLGNGASIAV SSSFGYGSLL DHAQQAGLLA DDVQQLFRSF 
GTSDFELILR LVWQASNVNR SLQIPDDRTH QAYLNVRECL IQAVRGVHPA YDLVSGHLPS
MYQFLKGFDT VLSLNYDLLV YWTMTYGLNV QDDHVFKDCF VWNGMFDDAW GRFREPLRER
TNTLVFYPHG SLALCRNVVE QEFKIHNAGE GLLEAILAEW RSERVVPLFV SEGTMSQKVS
SIQNSYYLST VYREVLTSQR FTLTLFGWGL GEHDRHLLRR MRGTGIQRVA VSVFRGDQVY
CNYAYQVIQD DLGPVHVDFF DSESPGCWIH AVPPALPVFG