Gene Rmet_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1460 
Symbol 
ID4038263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1580421 
End bp1581380 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content65% 
IMG OID637976844 
Producthypothetical protein 
Protein accessionYP_583612 
Protein GI94310402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.424115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCG GGGTGTTATG CGGACTGTTG GCGGGGGCAT TCTGGGGCAT GGTATTCATC 
GCGCCCAAGC TGCTGCCAGT GTTCTCCCCC TGGGAACTCG CGATCGGCAG GTACCTGGCC
TACGGTCTGG TGGCCTTCGT CGCAGCGCTA CCCCTGATGG GCCGCATCGC CCGCAAACTG
ACACGCGCCG ACTGCATCGC CCTGCTGCGC CAGGCATTCA CCGGCAACCT GCTCTACTAC
GTGCTGCTGG CTTTCGGCGT GCAGTTGGCG GGCGTCGGAC CGACCTCGCT GATCATTGGC
ATCCTGCCGA TTTCGGTCAC GCTGATGGGC CGGCGTGACC ATGGCGCCGT GCAGCTGCGC
CGGCTGGTGC CGCCACTGCT CGTGGTGGCA GCCGGGATCG CCTGCATCAA CATCGATCTT
TTCGCCGGGG GCGGCAGCGC GCACGGCGCC ACGATCGGCG CGGCGGCGCG CCCCGTCTGG
CAGAAAATCG CCGGTGTGAT CTGCGCGGCT GGCGCCCTGG TCTGCTGGAC GCTTTATGCC
GTCGACAATG CCCGCTACCT TCAGCGCAAT CCACACTACA GCGGCAACGA ATGGTCCGCG
CTCTACGGCT TGTCGACTGG GCTGGTATCG GCGGTTCTCG CCGCAATCGG CTGGGCGATG
TTTGGCGACA CCCTGACCGC CCCCGACAGC GGCCGCGACT GGCAGTTGTT CTGGATGGTC
AATGCGGCCG TGGCGCTCGG AGCGTCGCTA ATTGGCAACA ACCTCTGGAA CATTTCAAGC
CGCCGTTTGC CACTGACGCT GTCCGGTCAG ATGATCGTTT TCGAGACGCT CTTCGCGCTG
GCATATGGGT TTGTATTCGA TCATCGCTGG CCGCGGCCCC TCGAGATGGC CGCGATCATG
CTGTTGATGG CAGGCGTGGC GTGGTCCGTG CGCTTGCACG CGACCGACAA GTCTCAGTAG
 
Protein sequence
MGIGVLCGLL AGAFWGMVFI APKLLPVFSP WELAIGRYLA YGLVAFVAAL PLMGRIARKL 
TRADCIALLR QAFTGNLLYY VLLAFGVQLA GVGPTSLIIG ILPISVTLMG RRDHGAVQLR
RLVPPLLVVA AGIACINIDL FAGGGSAHGA TIGAAARPVW QKIAGVICAA GALVCWTLYA
VDNARYLQRN PHYSGNEWSA LYGLSTGLVS AVLAAIGWAM FGDTLTAPDS GRDWQLFWMV
NAAVALGASL IGNNLWNISS RRLPLTLSGQ MIVFETLFAL AYGFVFDHRW PRPLEMAAIM
LLMAGVAWSV RLHATDKSQ