Gene Rmet_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1450 
Symbol 
ID4038253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1571492 
End bp1572280 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637976834 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_583602 
Protein GI94310392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000674359 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.287096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCATG TCACTTCGCG CGACAACGCG CTGTTCAAAC AGTTAAAAGC CCTGACAGGG 
TCCACGCACC AGCGCCGCAA GGCGGGGCAG TCCGTGCTCG ATGGCATCCA TCTCGCGCAG
GCCTACGTGG CTGCGCTTGG GCAGCCCGCG AGCTGTGTGG TGAGCGAGCG CCATTATGAC
CACGCCGAGG TGCGCGCGCT GCTCGAGAAG ATCGACTCGG ACAAGCTGGT TGTATTGGCT
GATGCGTTGT TCGCGCAGAT TAGCAGTGTG GTCAACGGCG TCGATCTGAT GCTGGTGATC
GATACGCCGG CCGGACATCT CCCGGCAACC ATCGATACCG ATTGCATCAT TCTGGATGGT
CTGCAGGATG CGGGCAATGT CGGCTCGATT CTTCGAAGCG CTGCGGCCGC TGGCATTCCA
CATGCGTTCC TGACCAAAGG TTGCGCATTC GCCTGGTCGG TCAAGACGTT GCGTGCCGGT
ATGGGCGCGA ATTTCCACTT GAATATCGTC GAACATTGCA CGCTTGAGAT GCTTGAGAGC
CGGCTGGCAG TGCCGTTACT GGCGACGTCA TCCCATGCGG ACGCGGCGGT GTTCGATACA
GATCTGCGCC AGCCGGTTGG CTGGGTGATT GGCAATGAAG GGGGAGGAGT CAGCCCCGAG
TGGATGGCGC ATGTTTCCCG TACGGTTGGC ATTCCGCAGC CTGGAGGTTT GGAGTCGCTG
AATGTGGCCG CGGCAACGGC GGTCTGCCTG TTTGAAGCCG TCCGGCAACG CCGCGCTAGC
GGCGGATAG
 
Protein sequence
MKHVTSRDNA LFKQLKALTG STHQRRKAGQ SVLDGIHLAQ AYVAALGQPA SCVVSERHYD 
HAEVRALLEK IDSDKLVVLA DALFAQISSV VNGVDLMLVI DTPAGHLPAT IDTDCIILDG
LQDAGNVGSI LRSAAAAGIP HAFLTKGCAF AWSVKTLRAG MGANFHLNIV EHCTLEMLES
RLAVPLLATS SHADAAVFDT DLRQPVGWVI GNEGGGVSPE WMAHVSRTVG IPQPGGLESL
NVAAATAVCL FEAVRQRRAS GG