| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1448 |
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| Symbol | lpxB |
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| ID | 4038251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1569597 |
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| End bp | 1570802 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637976832 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_583600 |
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| Protein GI | 94310390 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000462507 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.282438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACA CCGTGCAGGC AGTGCTTCCC GCCGATGCGG GTGCTAATGG GAACAAGCGA
GGTAGTATCG CCATGGTTGC CGGTGAGGCA TCTGGCGACC TGCTCGCTTC GCTGCTGCTG
GAAGGCCTGC GCGCGAGGCT TGGCGAATCG GTGGATTACG CCGGTATCGG TGGCCATCGC
ATGATGGCGC AGGGATTTGT CTCGCATTGG CCGATGGAAA CGCTATCGGT CAATGGCTAT
GTCGAGGTTC TCGGCTCGCT ACGCGAAATT CTGGCCACGC GGCGTGAGAT TCGCGAGCAA
TTACTGGCGC GACCGCCGCT ATGCTTCATC GGCGTCGACG CTCCCGACTT CAACTTCGGT
CTGGAAGTGC CGCTGCGCCG CGCGGGCATT CCGGTTGTCC ATTTTGTCAG CCCGTCGATC
TGGGCTTGGC GCGGAGGCCG CATCCGCACG ATAGCGCGGG CCGTGGACCA TATCCTCTGC
CTGTTCCCGT TCGAGCCCGA GATCTATGCG AAGGCTGGCA TTCCGGCGAC CTATGTCGGC
CATCCGCTAG CTGACGTAAT CCCGATGGTG CCTGACGTAG CGGGTGCGAG GGCGAAGCTG
GCTTTGCCAG AAGGCAAGCG GATCGTGGCG GTGTTGCCTG GCAGTCGGCA GTCGGAGGTG
CGCAATCTCG GCGCGACGTT CTTCGCCGCG ATGGACCGTA TGCATCGCAT GGACGGCAAC
CTCGCTTTCG TGCTGCCTGT TGCAAGCGCA CCGCTGCGGG AGATCGTTGC TGGCTTGCAC
GCGCAGTATC CGGACATCGA CCTGACCGTG GTTGACGGCC AATCGCATCT CGCGATGGAG
TCCGCCGACG TGGTGCTGCT TGCAAGTGGC ACGGCAACGC TCGAGGCCGC GCTGTACAAG
AAACCCATGG TGATCTCGTA CAAGGTGCCC TGGCTAACGG CGCAGATCAT GAAACGGCAG
GGTTATCTGC CGTATGTCGG GCTGCCCAAT ATCCTGTCGG GACGCTTTGT TGTTCCCGAA
CTCCTACAGG ACGACGCGAC GCCGGAGGCG CTGGCGCGCG AGACGCTGCT GCAACTCAAT
GACGAGGGCA ATATTGCCTT CCTGCGGCAG CATTTCACGA CGATGCACGA AACCCTGAAG
CGCGACACGG CGAAGCTGGC TGCCGGCGTA GTCGTCGATC TGATGCGCAG CCGTGGAGTG
GTCTGA
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| Protein sequence | MVDTVQAVLP ADAGANGNKR GSIAMVAGEA SGDLLASLLL EGLRARLGES VDYAGIGGHR
MMAQGFVSHW PMETLSVNGY VEVLGSLREI LATRREIREQ LLARPPLCFI GVDAPDFNFG
LEVPLRRAGI PVVHFVSPSI WAWRGGRIRT IARAVDHILC LFPFEPEIYA KAGIPATYVG
HPLADVIPMV PDVAGARAKL ALPEGKRIVA VLPGSRQSEV RNLGATFFAA MDRMHRMDGN
LAFVLPVASA PLREIVAGLH AQYPDIDLTV VDGQSHLAME SADVVLLASG TATLEAALYK
KPMVISYKVP WLTAQIMKRQ GYLPYVGLPN ILSGRFVVPE LLQDDATPEA LARETLLQLN
DEGNIAFLRQ HFTTMHETLK RDTAKLAAGV VVDLMRSRGV V
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