| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1443 |
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| Symbol | |
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| ID | 4038246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1564200 |
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| End bp | 1566575 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637976827 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_583595 |
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| Protein GI | 94310385 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.680805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000148941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCAGCAT TGCCAGGCTT GGAGCCAATG CCCTGCATGA AATCGATGAG GAAGAGGGGA
TCGACTTTGA TCAGAAATAA GCGCATCTCG CTGGGTCTAC TGACGAGTGC CATTATTGCG
GCTTGGAGCC CGGCGGGCTT TGCCGCCGAT CCGTTCGTGG TCAAGGATAT CCGTGTGGAG
GGCCTGCAGC GCGTCGAGCC GGGCACGGTC TTCGGCTACC TGCCAGTTCG CGTTGGCGAA
ACTTTCACCG ACGACAAGGG TGCGGACGCG ATTCGCGCGC TCTATAACAC CGGTTTTTTC
AAGGACGTAC AGATCCGCGC CGAAGACGGC GTTCTGGTTG TCCAGGTCGA GGAACGTCCG
GCGATCTCGC AGCTGGAGTT CGTCGGCATC AAGGAATTCG ACAAGGACAC GCTGCGCCGC
TCGCTGCGCG CCGTTGGCGT GGCCGAGGCC CGCTATTACG ACAAGGCGCT GATCGACAAG
GCAGAGCAGG AACTCAAGCG CCAGTATGTG GCTCGCGGCT ACTATGCCGC CGAGGTGCAG
ACCACCGTGA CGCCAGTGGA CCGCAATCGC GTGTCAGTGG TGTTCAACGT TGATGAGGGC
CCGGTCGCCA AGATCCGCCA GATCAATATC GTCGGCAACA AGGCATTCAA GGAAAGCACG
CTGCGCGATG AAATGCAGCT TTCCACGCCG AACTGGCTCT CCTGGTACAC CAAGAACGAC
CTCTATTCGA AGCAGAAGCT GACGGCTGAC CTGGAGGCGC TGCGTTCGTA CTATCTCAAC
CGCGGCTACC TCGAATTCCA GATCGAGTCG ACGCAGGTGT CGATCACGCC GGACAAGAAG
GACATTTACC TGACGCTGAA TATCAGCGAA GGGGATCAAT ACAAGGTGTC CGACATCCGC
CTGGCCGGCG AAACGCTCGG CAAGCAGGAA GAGATGGAGA AGCTGCTGCA GCTCAAGAAG
GGCGACATCT TCTCGTCCGA AAAGCTGACG GCCAGCACCA AGGCAATTAC GGACCTGCTC
GGCACGTACG GCTACGCCTT TACGACGATC AACCCGCAAC CGCAGGTGGA TAAGGAAAAG
CGTGAAGTGG CGCTGACCCT GATGGTCGAC CCGGGCCGCC GCGTCTACGT GCGCCGCGTG
AACGTGGTGG GTAACAGCAA GACGCGTGAC GAAGTGGTGC GCCGCGAGAT GCGCCAGATG
GAATCGTCGT GGTTCGACAG CGAAAAGCTC CAGCAGTCGC AGGCACGTAT CAACCGGACG
GGCTACTTCA CTGACACCAA CATCACCACT GAAGACGTGC CGGGCGCGCC CGACCAGGTC
GACGTGAACG TGAACGTGAC GGAAAAGCCG ACCGGCCAGA TCAGTCTGGG TCTGGGCTTC
TCGTCAACCG ACAAGCTCGT GCTGCAGGCA GGTCTGCGCC AGGACAACGT GTTCGGTTCC
GGTACCAGCC TGGGCCTGGA TGTGAACACG GCCAAGTCGT TCCGTACGAT TGCGCTGACG
CAATACGACC CGTACTTTAC GGTTGACGGC ATTAGCCGAT CGACAGACAT CTACTACCGT
ACGTCGCGCC CGCTGTACTA CACCGGTGAT CAAGACTACA AGATCGTCTC GGCTGGCGGT
GGCTTCAAGT TCGGGGTGCC GTTCTCGGAG AACGACACGG TGTTCTTCGG CATCGGCTAC
GAGCGGACGC AGGTTTACAC CTCGCCCAAC ACGCCGAACC AGTACACGGC CTGGCTGCAG
AAGATCGGTA AGGCCAGCGG TGATCCGATC AACAACTTCC CGTTCACGAT CGGCTGGGCA
CGGGATCGCC GCGACAGCGC GCTGATTCCG ACCAAGGGTC CGTACACGCA GGCCAACCTG
GAGGTGGGTG TTCCGGGCGG CGACACGCAG TACTATCGCG CAAGCCTGCA GCAGCAGTAT
TTCTACCCGC TGTCGAAGTC CTTCACGCTG GCCTTCAACG GCGAAGTGGC CTATGGTCAC
GGTTACGGTA ATACGCCGTT CCCGGTGTTC AAGTACTTCT ACGCCGGCGG TATCGGCTCG
GTGCGTGGCT ACCAGACCAG CACGCTCGGT CCGAAGGACC AGAACGGTAA CCCGGTGGGT
GGCGCATCGA AGATGATCGG CAACGTGGAA TTCGTGTTCC CGCTGCCTGG CTCGGGTGTT
GACCGCACGC TGCGACTGTT CACGTTCTTC GACTTCGGTA ACGTTTACCA GGAAGGGGCG
CCGCTTTCGT TCAGCGATCT TAAGTATTCG ACTGGTTTCG GTATGTCGTG GCTTTCGCCG
ATCGGTCCGC TGAAGGTCAG CATGGGCTTC CCGCTGAAGA AGGACGAAAC TGACAAGGTT
CAACGCTTCC AGTTCCAGAT CGGTACCGCG TTCTGA
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| Protein sequence | MPALPGLEPM PCMKSMRKRG STLIRNKRIS LGLLTSAIIA AWSPAGFAAD PFVVKDIRVE
GLQRVEPGTV FGYLPVRVGE TFTDDKGADA IRALYNTGFF KDVQIRAEDG VLVVQVEERP
AISQLEFVGI KEFDKDTLRR SLRAVGVAEA RYYDKALIDK AEQELKRQYV ARGYYAAEVQ
TTVTPVDRNR VSVVFNVDEG PVAKIRQINI VGNKAFKEST LRDEMQLSTP NWLSWYTKND
LYSKQKLTAD LEALRSYYLN RGYLEFQIES TQVSITPDKK DIYLTLNISE GDQYKVSDIR
LAGETLGKQE EMEKLLQLKK GDIFSSEKLT ASTKAITDLL GTYGYAFTTI NPQPQVDKEK
REVALTLMVD PGRRVYVRRV NVVGNSKTRD EVVRREMRQM ESSWFDSEKL QQSQARINRT
GYFTDTNITT EDVPGAPDQV DVNVNVTEKP TGQISLGLGF SSTDKLVLQA GLRQDNVFGS
GTSLGLDVNT AKSFRTIALT QYDPYFTVDG ISRSTDIYYR TSRPLYYTGD QDYKIVSAGG
GFKFGVPFSE NDTVFFGIGY ERTQVYTSPN TPNQYTAWLQ KIGKASGDPI NNFPFTIGWA
RDRRDSALIP TKGPYTQANL EVGVPGGDTQ YYRASLQQQY FYPLSKSFTL AFNGEVAYGH
GYGNTPFPVF KYFYAGGIGS VRGYQTSTLG PKDQNGNPVG GASKMIGNVE FVFPLPGSGV
DRTLRLFTFF DFGNVYQEGA PLSFSDLKYS TGFGMSWLSP IGPLKVSMGF PLKKDETDKV
QRFQFQIGTA F
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