| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1441 |
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| Symbol | |
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| ID | 4038244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1561512 |
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| End bp | 1562690 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976825 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_583593 |
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| Protein GI | 94310383 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000100102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAACGCA TCACCATCCT CGGCGCTACG GGTTCCATCG GCGAGAGCAC GCTTGACGTG
GTTCGGCGCC ATCCGGATCG CTACTCTGTC CACGCACTCA GCGCGCATCG GCAAGTCGAC
AAGCTGGCGG CCGCCTGCGT GGAGTTTCGT CCCGCGCGGG CCGTGGTAGG GTCGGCCGAG
GCGGCGCGTG AACTCGAAGC CAAGCTGCGT GCCGCCGGTG TTCCCACCGA GGTGAGCTAT
GGCGAGACCG CGCTTGAATC CATCGCCGAG GACGCTGGCA CGGATGCAGT GATGGCCGCC
ATCGTCGGTG CGGCAGGCTT GCGATCCTCG CTGGCGGCTG CTCGGGCCGG CAAACGTGTG
CTGCTGGCCA ACAAGGAATC GCTCGTGATG TCCGGCGGCA TCTTCATGGA TGCCGTGCGT
GAGCATGGCG CCACGCTGCT GCCCATCGAC AGCGAACACA ACGCCATCTT CCAGTGCCTG
CCGACCAGTG ATCCGCGCTA TGGCGCCGGG GTATCGAAGG TGCTGCTTAC CGCCTCGGGT
GGCCCGTTCC GCACGCGTGA TCCGTCCACG CTGCACGACA TCACGCCCGA CCAGGCCTGC
GCGCATCCGA AGTGGGTGAT GGGGCGGAAG ATATCGGTCG ATTCCGCGAC GATGATGAAC
AAGGGTCTCG AGGTCATCGA GGCGCACTGG CTGTTTGGCG CGCCGGCCGA GAAAATCGAG
GTGCTGATCC ATCCGCAAAG CATTGTCCAC TCGATGGTGG CCTACGCGGA CGGCTCCGTG
CTGGCGCAAC TGGGCAACCC CGACATGCGG ACACCCATCG CCTACGGTAT GGCCTATCCG
GAGCGGATCG ACTCCGGTGT AACGCCGCTC GATCTGACGG TTGCCGGTGG CCTGCATTTT
GAGACTCCAG ACCTTGAGCG CTTCCCATGC CTTGGGCTAG CCTTTGATGC ATTGCGTGCC
GGCGGCGTGG CGCCCGCAGT GCTAAATGCA GCCAACGAGG TGGCCGTGGA AGCGTTCCTG
AACGGCAAGA TCCGCTTCAC CGATATCGCT CGCGTGGTGG CAACCGTGCT GGAGCAGCCG
GCGGACGGAT CGGCTGATAC GCTCGAGGGC GTGCTGGCTG CCGATTCAGC AGCGCGTCGC
GGCGCGCAGG CGCAGTTGGG AAGCCTGGCT GGCCGTTGA
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| Protein sequence | MQRITILGAT GSIGESTLDV VRRHPDRYSV HALSAHRQVD KLAAACVEFR PARAVVGSAE
AARELEAKLR AAGVPTEVSY GETALESIAE DAGTDAVMAA IVGAAGLRSS LAAARAGKRV
LLANKESLVM SGGIFMDAVR EHGATLLPID SEHNAIFQCL PTSDPRYGAG VSKVLLTASG
GPFRTRDPST LHDITPDQAC AHPKWVMGRK ISVDSATMMN KGLEVIEAHW LFGAPAEKIE
VLIHPQSIVH SMVAYADGSV LAQLGNPDMR TPIAYGMAYP ERIDSGVTPL DLTVAGGLHF
ETPDLERFPC LGLAFDALRA GGVAPAVLNA ANEVAVEAFL NGKIRFTDIA RVVATVLEQP
ADGSADTLEG VLAADSAARR GAQAQLGSLA GR
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