Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1407 |
Symbol | |
ID | 4038210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1518979 |
End bp | 1520871 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976791 |
Product | oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein |
Protein accession | YP_583559 |
Protein GI | 94310349 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0243275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.190368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA CCGTTTCGAA ACAAGGCATC GTGCTGCCGC CCGAGCGCGT GGTGGCCGTC GACAACCTCA CCGTGCGCTT CGCCACCTCG GAGCGTACCG TCGAGGCCGT GCGCAACCTG TCGTTCCATG TCGACCGTGG CGAAACGCTG GCCGTGGTTG GCGAGTCGGG CTCGGGCAAG TCGGTGACGT CGCTGGCGTT GATGCGCCTG GTGGAGCACG GTGGCGGCAA GATCGCCAAT GGCGCCATGG CGCTGCGCCG GCGCAATGGC GAGGTGCTCG ATCTGGCCAA TGCCGGCGAA TCGACGTTGC GCAAGGTGCG CGGCGCGGAC GTGGCGATGA TCTTCCAGGA GCCGATGACC TCACTGAATC CGGTGTTTCC GGTTGGTGAG CAGATCGCGG AGTCGATTCG CCTGCACCAG GGCAAGAACA AGGCCGCGGC CCTTGCCGAG GCGCTGCGTA TGCTGGAACT GGTGCGCATT CCGGAAGCAC GGCGCGTGCT CGACCGCTTC CCGCATCAAC TCTCAGGCGG CATGCGGCAG CGCGTGATGA TCGCGATGGC GCTGTCCTGC AAGCCGGGTT TGCTGATCGC GGACGAGCCG ACCACCGCGC TCGACGTGAC GATCCAGGCG GAGATCCTGC AGCTTATCCG CAATCTCCAG GCAGAGATGA ACATGGGCGT GGTTTTCATC ACGCACGACA TGGGCGTGGT GGCCGAGGTG GCCGATCGTG TGCTGGTGAT GTACCGCGGC GAAAAGGTGG AAGAGGGCAC GTCCGACCAG GTGTTCCACG CGCCCGCCCA CCCGTACACG CGCGCGCTGC TGTCGGCCGT GCCGAAGCTC GGGGCGATGG CCGGCACCGA TCTGCCGGCC CGCTTCCCGC TGGTGCAGAT GAGCGACACC GACAAGGTGG TCGAGGAAGC GCCGCAGGAC ACCATTCCGG CAGGCGCCGA GCCGATCCTG CGCGTACGCG ACCTGGTGAC GCGCTTCGAT GTGCCAGGCG GCCTGTTTGG CAAGGTCACG CGCCGCGTTC ACGCGGTGGA GCAGGTCAGC TTCGATCTCT ACCCGGGCGA GACGCTGGCG CTGGTTGGCG AGTCGGGCTG CGGCAAATCG ACCACGGGAC GTTCGCTGTT GCGGCTGGTC GATTCGCAGA GCGGCACGAT CGAGTTCGCA GGCCAGAACA TCAGCCAGAT GCGGGGACCG GCGCTTCAGG CGCTACGCCG CAATATCCAG TTCATCTTCC AGGACCCGTT TGCGTCGCTG GACCCGCGCG TGCCGGTTGG CTACTCGATC ATGGAGCCGC TGCTGGTGCA CAAGGTGGCC AGCGGCAAGG AAGCCGAGGC GCGTGTCGCC TGGCTGCTCG AAAAGGTGGG CCTGACAGCC GCGCACGCAT CGCGCTATCC GCACGAGTTC TCGGGCGGCC AGCGCCAGCG GATCTGCATC GCGCGCGCCC TGGCGCTGAA CCCGAAGGTG GTCGTCGCCG ACGAATCGGT GTCGGCGCTC GACGTGTCGA TCCAGGCGCA GATCGTCAAC CTGATGCTCG GCCTGCAGCG CGAGCTGGGC GTGGCCTTCC TGTTCATCTC GCACGACATG GCCGTGGTGG AGCGCGTAAG CCACCGCGTG GCCGTGATGT ATCTGGGCCA GATCGTCGAG ATCGGTCCGC GTCGCGCTAT CTTCGAGAAC CCGCAGCACC CGTACACGAA GAAGCTGATG TCGGCGGTGC CAATTGCCGA TCCGGCCCGA CGCCACATGA AGCGCGAGCC GCTGTCCGAC GAGATTCCCA GCCCGATCCG CGCGGTCGGC GACGAGCCAG TGGTCCAGCC GCTGGTTGCC GTGGCCGGCA GTGGCGCGCA CGGACATTAC GTAGCCCGGC ACGCCGTCGG CGGCGCCTAC TGA
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Protein sequence | MAKTVSKQGI VLPPERVVAV DNLTVRFATS ERTVEAVRNL SFHVDRGETL AVVGESGSGK SVTSLALMRL VEHGGGKIAN GAMALRRRNG EVLDLANAGE STLRKVRGAD VAMIFQEPMT SLNPVFPVGE QIAESIRLHQ GKNKAAALAE ALRMLELVRI PEARRVLDRF PHQLSGGMRQ RVMIAMALSC KPGLLIADEP TTALDVTIQA EILQLIRNLQ AEMNMGVVFI THDMGVVAEV ADRVLVMYRG EKVEEGTSDQ VFHAPAHPYT RALLSAVPKL GAMAGTDLPA RFPLVQMSDT DKVVEEAPQD TIPAGAEPIL RVRDLVTRFD VPGGLFGKVT RRVHAVEQVS FDLYPGETLA LVGESGCGKS TTGRSLLRLV DSQSGTIEFA GQNISQMRGP ALQALRRNIQ FIFQDPFASL DPRVPVGYSI MEPLLVHKVA SGKEAEARVA WLLEKVGLTA AHASRYPHEF SGGQRQRICI ARALALNPKV VVADESVSAL DVSIQAQIVN LMLGLQRELG VAFLFISHDM AVVERVSHRV AVMYLGQIVE IGPRRAIFEN PQHPYTKKLM SAVPIADPAR RHMKREPLSD EIPSPIRAVG DEPVVQPLVA VAGSGAHGHY VARHAVGGAY
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