| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1393 |
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| Symbol | |
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| ID | 4038196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1502155 |
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| End bp | 1503681 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976777 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_583545 |
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| Protein GI | 94310335 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.230951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.648056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG AATCCACCGC GCCGGCAGGT ACTGGCAGCG GGGAATCCGG AGGCGGCAAC
CACGGCGGTG GCGGCGGAGG GCCGCGCCGC GGTGGGCCCA CGCGCGCGCA ACTGCGCGCC
CGCTATGGCG ATCGCCTGCG CTGGCTGATC CTGTTGACGC TGATGCTTGG CACGGTGTCC
TCCATCGTGT CATCGACCAT TGTCAATGTC GCCATTCCGG ACCTGAGCCG GCATTTCCTG
CTCGGCCAGG AGCGCGCCCA ATGGGTGGCG GCCAGCTTCA TGATCGCCAT GACGCTGTCG
ATGCTGCTCA CCCCCTGGCT GCTGAACCGA TATGGCCTGC GCAGGACCTT CATTGGTGCG
CTGGCGCTGC TTGGTGCGGG TGGCCTGATA GGTGGTGTCG CGCCCACCTT CGGCGTGATG
CTGGCGATGC GTGTGGCCGA AGGCGTCGCG GCGGGCATCA TGCAGCCGCT GCCCAATATT
TTCATCCTGC GCGTGTTTGA CGAACGTGAG CAGGGCAAGG CCCTGTCGCT GTTCGGCTTC
GGCGTGGTGC TGGCGCCGGC CGTCGGGCCC AGCGTGGGCG GCTTTCTCGT CGAGACATTC
GGCTGGCGCT CGATTTTCTT CGTGGTGGTG CCGCTGACGC TGATCGCCCT GGCGATGGCG
CGCCGCTTCA TGGCGGTGGA CTCCGCGATG ATGGGTGAGC GCAAGCCGCT GGACTGGCGC
GGCCTGATGC TGGTCGGCGT GGCTACTGTC AGCCTGCTCA ACGGGCTGGT GGAGATGCGC
GGCGACGTGC ATTCCGGGAT TGGACTGGTC GCCCTGGGCG TGGTCATGCT CGCTGGATTC
GTGTTCTGGC AACTGCGCGC GCCGTATCCG CTGATGAACA TGCGGCTGTA CAGCTACCAG
CAGTTCTCGG CCGGCGCCAT TGTGGCGTTC ATTTACGGGG CGGGGCTGTT CGGCTCCACG
TACCTGCTGC CGGTCTATAT GCAGATGGCG CTGTCCTATA CGCCGTCGGC CGCGGGCATC
GTGCTGATGC CGGCTGGCGT TGCGCTGGCG GTGACGATTG CCGTTGCCGG GCGCCTGACC
AGCCGGGTCC CGCCGCACCG GCAGGTGTCG TTCGGGCTGG CACTGCTTGC GGGGTCGTTC
CTGCTCATGG CCACCGGGTC GACGGCTACG CCATACCTGC TGCTGGTCTT ATATGCGGTG
ATCGGCCGGA TCGGCCTGGG CTGCGTCCTG CCCTCGCTGA CAATGGGCTC GATGCGCGGG
GTGGATTTCT CCATGATCGC GCAGGGCTCG AGCTGCATCA ACTTCGTGCG GCAACTGGGC
GGGGCGATCG GCGTGAGTCT GGCTGGTGTG GGGCTGCAAT GGCGCCTTGC CGAACACGGT
GCCGTGCTCG GCAAGGGCGG TGACGTGGCG GCCCAAGCCG CGCGCATCCA GGCTTTCGAT
GAGACTTTCC TGGCCGTTGG CGTGGTGATT GCCACGGCCA TCCTGGCCGC CTGGCGCATC
CGCCCGCGGC CAGTGCCGGC TGATTGA
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| Protein sequence | MKRESTAPAG TGSGESGGGN HGGGGGGPRR GGPTRAQLRA RYGDRLRWLI LLTLMLGTVS
SIVSSTIVNV AIPDLSRHFL LGQERAQWVA ASFMIAMTLS MLLTPWLLNR YGLRRTFIGA
LALLGAGGLI GGVAPTFGVM LAMRVAEGVA AGIMQPLPNI FILRVFDERE QGKALSLFGF
GVVLAPAVGP SVGGFLVETF GWRSIFFVVV PLTLIALAMA RRFMAVDSAM MGERKPLDWR
GLMLVGVATV SLLNGLVEMR GDVHSGIGLV ALGVVMLAGF VFWQLRAPYP LMNMRLYSYQ
QFSAGAIVAF IYGAGLFGST YLLPVYMQMA LSYTPSAAGI VLMPAGVALA VTIAVAGRLT
SRVPPHRQVS FGLALLAGSF LLMATGSTAT PYLLLVLYAV IGRIGLGCVL PSLTMGSMRG
VDFSMIAQGS SCINFVRQLG GAIGVSLAGV GLQWRLAEHG AVLGKGGDVA AQAARIQAFD
ETFLAVGVVI ATAILAAWRI RPRPVPAD
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