| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1387 |
|---|
| Symbol | |
|---|
| ID | 4038190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1496857 |
|---|
| End bp | 1497291 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637976771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583539 |
|---|
| Protein GI | 94310329 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00373989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.527764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC ACATTCTGCT GCCCACCGAC GGCTCGGAGC TGTCCAAGAA AGCCATCGAC
GGCGGTCTTG AACTGGCCAA GGCCATCGGC GCCCGCGTGA CCGCCTACGT CTGTCTCGAG
GAATATCCGT ACACACCCTT CAGCGAGATC GTGGTTGAGG CTCCGCAAGC GTTCAAGGAA
CGCATCGAGA ACCAGGCCAG GCTCTACCTG AAGGAAATCG AGAACGCCGC CGTGGCGGAT
GGCCTGCCGT TCGATGCCGA CATGACCACC TTTGCGGTGC CCTATCTCGG CATCATCGAC
GCGGCGGAAC GCCATGGCTG CGATGTCATC TTCATGGCAT CCCACGGCCG GCGCGGCCTG
TCGGGCCTGC TACTCGGCAG CGAAACGCAG AAGGTGCTGA CCCACACTGA CATCCCGGTA
ATTGTCTATC GATGA
|
|---|
| Protein sequence | MFKHILLPTD GSELSKKAID GGLELAKAIG ARVTAYVCLE EYPYTPFSEI VVEAPQAFKE
RIENQARLYL KEIENAAVAD GLPFDADMTT FAVPYLGIID AAERHGCDVI FMASHGRRGL
SGLLLGSETQ KVLTHTDIPV IVYR
|
|---|
| |