Gene Rmet_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1377 
Symbol 
ID4038180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1486171 
End bp1487088 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID637976761 
Productsulfate ABC transporter permease protein CysW 
Protein accessionYP_583529 
Protein GI94310319 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.370471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTG CAATTTCCCG TCTGGGTGGC CCAGGTGCCC CAGGCGCCCC AAGTGCCCAC 
GTACAGGCCG CGCAGTTCCC GCACGACGCC ACTGGCGAAT CACGCTGGGT GCGGTACGGG
CTGATCACGG TCGCGGTGCT GTTCCTGGGG CTGTTCCTGT TCATCCCGCT GGCGTCAGTG
TTCTATGAGG CGCTGCGCAA GGGTGTCGAT ACCTATCTGG CTGCATTGAC CGAGCCGGAT
GCCGTGTCGG CCATCAAGCT GACGCTGACG GTCGCCGCGA TCGCGGTGCC GCTCAATGTG
GTGTTCGGCG TGGCCGCCGC GTGGGCCATC GCCAAGTTCG ATTTCCGCGG CAAGAACCTG
CTGATCACGC TGATCGACCT GCCGTTCTCG GTGTCGCCTG TGATCTCCGG CCTGATCTAC
GTGCTGATGT TCGGCGCGCA GGGTTGGTTC GGACCATGGC TGGAGGCGCA CGACATCAAG
ATCATGTTCG CCGTGCCCGG GATCGTGCTG GCGACGATCT TCGTGACGTT CCCGTTCGTG
GCGCGCGAGC TGATTCCGCT GATGCAGGCG CAGGGCAGCG AGGAGGAAGA GGCTGCCATC
GTGCTGGGCG CTTCCGGCTG GCAGACGTTC TGGCACGTGA CGCTGCCGAA CATCCGCTGG
GGCCTGCTAT ACGGCGTGAT TCTCTGCAAC GCGCGGGCGA TGGGCGAGTT CGGCGCCGTG
TCGGTGGTAT CGGGTCATAT CCGCGGCCTG ACCAACACCA TGCCGCTGCA CGTCGAGATT
CTCTACAACG AATACAACTT CGCGGCCGCG TTCGCGGTGG CGTCCCTGCT GACGCTGCTG
GCGCTGGTCA CGCTCGGTAT CAAGACGCTG GTCGAAATCC GCGCCAGCCG GGAACAACTG
GAAGGGCAGC CATCATGA
 
Protein sequence
MAGAISRLGG PGAPGAPSAH VQAAQFPHDA TGESRWVRYG LITVAVLFLG LFLFIPLASV 
FYEALRKGVD TYLAALTEPD AVSAIKLTLT VAAIAVPLNV VFGVAAAWAI AKFDFRGKNL
LITLIDLPFS VSPVISGLIY VLMFGAQGWF GPWLEAHDIK IMFAVPGIVL ATIFVTFPFV
ARELIPLMQA QGSEEEEAAI VLGASGWQTF WHVTLPNIRW GLLYGVILCN ARAMGEFGAV
SVVSGHIRGL TNTMPLHVEI LYNEYNFAAA FAVASLLTLL ALVTLGIKTL VEIRASREQL
EGQPS