Gene Rmet_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1372 
Symbol 
ID4038175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1481819 
End bp1482625 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID637976756 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_583524 
Protein GI94310314 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCCATTCCAT TGCGCCACGC CGGATCGACT GGCGCCAGGC CGCCCGCGCG 
ATTGCGCCGT GGATCGTCCC GATCCTGCTG ATCGTCGTCT GGCAGGTTGC CTCGCAGGCG
GGCTGGCTAT CCAACCGCGT GCTGCCAGCA CCGTTGGCCG TGGTCGAAGC GGCCTGGACG
CTGGCCGCAT CCGGCGAACT CTGGAAGCAC GTGTGGATCA GCACATGGCG CGCGCTGGTC
GGTCTGGCCA TCGGCGGCGG TCTGGGTCTC GTACTCGGGC TGCTGACCGG CACGTTTCGC
ACGGCTGCCA CGCTGCTCGA CAGCACGCTG CAGATGGTGC GCAACATCCC GCCGCTGGCG
CTGATTCCGC TGGTGATTCT CTGGTTCGGC ATTGACGAGA CGGCCAAGTT ATTTCTGGTG
GCGCTCGGCG TGTTCTTTCC GGTGTACCTG AATACGTACC ACGGCATCCG CGCGGTCGAC
CCGGCGTTGG TCGAAATGGC GCGCAGCTAT GGCCTGTCGG GCTGGCGCCT GTATCGCGAG
GTGATCCTGC CCGGCGCGCT GCCCGGCATC CTCGTCGGCG TGCGGTTCTC GCTCGGGTTG
ATGTGGGTGA TCCTGATCGT TGCGGAAACC ATCTCCGCCC AATCGGGTAT CGGCTACATG
ACGATGAACG CGCGCGAGTT CCTGCAGACC GATGTGGTGC TGGTGGGCAT CCTGCTCTAC
GCGCTGCTCG GCAAGCTGGC CGACGTGCTG TCACGGGCGC TGGAGCGGCA CTGGCTGCGT
TGGCACCCCG GTTACCTGTC TGCCTGA
 
Protein sequence
MSAPHSIAPR RIDWRQAARA IAPWIVPILL IVVWQVASQA GWLSNRVLPA PLAVVEAAWT 
LAASGELWKH VWISTWRALV GLAIGGGLGL VLGLLTGTFR TAATLLDSTL QMVRNIPPLA
LIPLVILWFG IDETAKLFLV ALGVFFPVYL NTYHGIRAVD PALVEMARSY GLSGWRLYRE
VILPGALPGI LVGVRFSLGL MWVILIVAET ISAQSGIGYM TMNAREFLQT DVVLVGILLY
ALLGKLADVL SRALERHWLR WHPGYLSA