Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1358 |
Symbol | |
ID | 4038161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1467642 |
End bp | 1468382 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637976742 |
Product | acetyacetyl-CoA reductase |
Protein accession | YP_583510 |
Protein GI | 94310300 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAGC GCATTGCATA TGTGACCGGC GGCATGGGCG GCATCGGGAC CGCGATTTGC CAGCGACTGG CGCGGGATGG TTACAAGGTG GTGGCGGGCT GCGGCCCGAA TTCGCCACGT CGTGAGAAGT GGCTCGAACA GCAACGCGCG CTCGGGTTTG AATTCGTGGC GTCCGAAGGC AACGTCGCCG ACTGGGACTC CACCAAGGCA GCCTTCGATA AGGTCAAGTC CGAAGTGGGC GAGGTCGATG TGCTGATCAA CAACGCCGGC ATCACGCGAG ACGTAGTGTT CCGCAAGATG ACCCGCGCGG ACTGGGATGC GGTGATCGAC ACGAATCTGA CGTCGCTGTT CAACGTGACC AAGCAGGTCA TCGACGGCAT GGCTGACCGC GGCTGGGGTC GAATCGTCAA TATTTCGTCG GTGAACGGCC AGAAGGGTCA GTTCGGTCAG ACCAACTACT CGACCGCCAA GGCAGGCCTG CACGGCTTCA CGATGGCGCT GGCGCAGGAA GTGGCCACCA AGGGCGTGAC CGTGAACACG GTGTCGCCGG GCTACATCGC CACGGACATG GTCAAATCGA TTCGCCAGGA TGTGCTCGAC AAGATCGTCG GCACGATTCC GGTCAAGCGT CTGGGCACGC CCGAAGAAAT CGCCTCGATC TGCGCTTGGC TGTCGTCGGA CGAGTCGGGT TTCTCCACCG GTGCCGACTT CTCGCTGAAT GGCGGCCTGC ACATGGGCTG A
|
Protein sequence | MTQRIAYVTG GMGGIGTAIC QRLARDGYKV VAGCGPNSPR REKWLEQQRA LGFEFVASEG NVADWDSTKA AFDKVKSEVG EVDVLINNAG ITRDVVFRKM TRADWDAVID TNLTSLFNVT KQVIDGMADR GWGRIVNISS VNGQKGQFGQ TNYSTAKAGL HGFTMALAQE VATKGVTVNT VSPGYIATDM VKSIRQDVLD KIVGTIPVKR LGTPEEIASI CAWLSSDESG FSTGADFSLN GGLHMG
|
| |