| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1343 |
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| Symbol | |
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| ID | 4038146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1452185 |
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| End bp | 1452457 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637976727 |
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| Product | putative conjugal transfer trbD transmembrane protein |
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| Protein accession | YP_583495 |
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| Protein GI | 94310285 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.305343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC CGGATACCTT CGCGGCTGGG TTCGAGGTGC CGCTGCATCG CTCGCTGACC
GAGCCGATCC TGCTGGGCGG TGCGCCGCGC ACCGTGGCAA TCGCCAACGG CACGCTGGCC
GCCGCCGTCG GGCTAGGCCT GCAACTGTGG ATTCCTGGCG TCGTGCTCTG GATCGTCGGC
CATTCGCTGG CGGTATGGGG CGCGCGCGTC GATCCGCAGT TCATGGCCGT GTTCGCCCGG
CACATCAAGC ACCGCCCGCT GCTGGACGTG TGA
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| Protein sequence | MSGPDTFAAG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGVVLWIVG
HSLAVWGARV DPQFMAVFAR HIKHRPLLDV
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