| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1342 |
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| Symbol | |
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| ID | 4038145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1451805 |
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| End bp | 1452188 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976726 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_583494 |
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| Protein GI | 94310284 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0563468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGA TGACCATTTC TGCTTTCCGT GTTTCCGTAA ATCCGGCTTT GCGCCTTGCA
CGGCTGCGTA GCCTGGCCCG CCCTGCTGGG CAAGGGCTGC TGCTGGCCGC GCTGCTGCTG
TTCCTGGCCG GCACCGCGCA GGCCGCCGGT TCCTCGATGC CGTGGGAAGG CCCGCTGCAA
TCCATCCTCG AATCCATCCA GGGGCCGGTG GCGCGCATCG TCGCGGTCAT CATCATCATC
GCAACCGGCC TCGCGCTGGC CTTCGGCGAC ACGTCGGGTG GTTTCCGCAA GCTGATCCAG
ATCGTGTTCG GCCTGTCCAT CGCGTTCGCG GCTTCGAGCT TCTTCCTGTC GTTCTTCAGC
TTCTCCGGCG GGGCCGTCGT ATGA
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| Protein sequence | MTQMTISAFR VSVNPALRLA RLRSLARPAG QGLLLAALLL FLAGTAQAAG SSMPWEGPLQ
SILESIQGPV ARIVAVIIII ATGLALAFGD TSGGFRKLIQ IVFGLSIAFA ASSFFLSFFS
FSGGAVV
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