| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1335 |
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| Symbol | |
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| ID | 4038138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1446018 |
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| End bp | 1446806 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976719 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_583487 |
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| Protein GI | 94310277 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00696289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.955731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAT CAAATCCCGA AGGAGGACGA TTCACTATGA AATACATCTT CAAAGGTGAC
AGCGCGCTGG TCAGTGGCGC CGGCTCGGGT ATCGGCGAGG CAACGGCACA CCTGCTCGCC
ATAAATGGTG TGCAGGTGGT TGCCTCCGAC ATCGACTTCG AGGCCGCCCG ACGTGTGACA
CAGGCCATCA TCGCCGCCGG CGGCCGCGCC GTGGCACACG AGGGCAATGC GGCCAAACCC
GAGGACGCCG GTGCGGCGGT GCAGTGCGCA CTCAAGCATT TCGGTTCTCT GCACCTGGCT
TTCAACAACG CTGGCATTGC CGGAGAACTC AAGCCTGCAG GCGAACTGGC GGCCGAGGAA
TGGCAACGTG TCATCGATAC CAACCTCTCG GGTGTGCAGC ATGCCATGCG CGCGCAGATC
CCGGCCATCC TGGCCGCCGG CGGCGGCGCC ATCGTCAACA TGTCGTCGGT CCTGGGATTA
GTCGGCAGCG CGGACGCACC GGCCTACGTC GCGGCCAAGC ACGGGGTGAC AGGTCTCACG
CGCTCGGCGG CGTTGGCCTA TTCGGCACAG GGCGTCCGCA TCAACTCGCT CCATCCGGGC
TATATCGAAA CTCCGCTGCT CAAGGCGCTC GACGAGGCCA CACTGGCAGC GCTGAAGGGG
CTGCACGCCA TCGGGCGCCT GGGCCGGCCC GAGGAGATCG CCCACGCAGC CTGCTTCCTG
CTGTCCGAAG GTGCCAGCTT CATGTGCGGC AGCGCCATGG TGGTAGATGG CGGTTATACG
GCGGCTTGA
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| Protein sequence | MNQSNPEGGR FTMKYIFKGD SALVSGAGSG IGEATAHLLA INGVQVVASD IDFEAARRVT
QAIIAAGGRA VAHEGNAAKP EDAGAAVQCA LKHFGSLHLA FNNAGIAGEL KPAGELAAEE
WQRVIDTNLS GVQHAMRAQI PAILAAGGGA IVNMSSVLGL VGSADAPAYV AAKHGVTGLT
RSAALAYSAQ GVRINSLHPG YIETPLLKAL DEATLAALKG LHAIGRLGRP EEIAHAACFL
LSEGASFMCG SAMVVDGGYT AA
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