Gene Rmet_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1320 
Symbol 
ID4038123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1433845 
End bp1434756 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID637976704 
Productacetaldehyde dehydrogenase 
Protein accessionYP_583472 
Protein GI94310262 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4569] Acetaldehyde dehydrogenase (acetylating) 
TIGRFAM ID[TIGR03215] acetaldehyde dehydrogenase (acetylating) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.197836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.426986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCAAATGTGC GCTGATCGGA CCAGGCAATA TCGGCACCGA TCTGCTGGCC 
AAGCTCAAGC GCAGCTCGGT GCTGGAGCCG GTGTGGATGG TGGGCATCGA CCCGGAATCG
GAGGGGCTGA ACCGAGCCCG TGAGCTCGGC ATCAAAACCA CGGCGGAAGG TGTCGACGGG
CTGCTGCCGC ATGTGCTGGC CGATGGTGTG CAGATCGCGT TTGATGCCAC CAGTGCATAT
GTTCACGCGG AAAACGCGCG CAAGCTTAAC GCGCTGGGCG TGATGATGAT CGATCTGACG
CCGGCGGCAA TTGGCCCGTA CTGCGTACCG CCGGTCAATT TGAAAGAGCA CCTGGGCAAA
CGCGAGATGA ATGTAAACAT GGTCACCTGT GGCGGGCAGG CCACCATTCC GATGGTCGCT
GCGGTCTCGC GCGTGCAGCC GGTCGCTTAC GGAGAAATCG TCGCGACCGT ATCGAGCCGA
TCGGTGGGGC CCGGCACGCG CAAAAACATT GACGAATTCA CGCGGACCAC GGCCGGCGCG
GTGGAAAAGG TGGGGGGCGC GAGGAAGGGC AAAGCCATCA TCATCATCAA CCCGGCGGAG
CCTCCGCTGA TGATGCGCGA CACGATTCAT TGCCTGACCG AAACCGAGCC GGATCAGCAA
AGGATTGCCG AGTCCATCCA CGCCATGATC GAAGAGGTCC AGAAGTACGT GCCCGGTTAC
CGGCTGGTCA ACGGCCCGGT GTTTGACGGC AAGCGTGTGA CGGTCTTCAT GGAGGTGGCG
GGCCTGGGGG ACTATCTGCC CACGTACGCC GGCAACCTGG ACATCATGAC CGCTGCCGCG
GCCCGGACCG CCGAGATGTT TGCCGAAGAG ATGATTGCCG GCAATCTCAC GCTCGAACCG
GTTGTCGCTT GA
 
Protein sequence
MKKIKCALIG PGNIGTDLLA KLKRSSVLEP VWMVGIDPES EGLNRARELG IKTTAEGVDG 
LLPHVLADGV QIAFDATSAY VHAENARKLN ALGVMMIDLT PAAIGPYCVP PVNLKEHLGK
REMNVNMVTC GGQATIPMVA AVSRVQPVAY GEIVATVSSR SVGPGTRKNI DEFTRTTAGA
VEKVGGARKG KAIIIINPAE PPLMMRDTIH CLTETEPDQQ RIAESIHAMI EEVQKYVPGY
RLVNGPVFDG KRVTVFMEVA GLGDYLPTYA GNLDIMTAAA ARTAEMFAEE MIAGNLTLEP
VVA