| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1307 |
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| Symbol | |
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| ID | 4038110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1422721 |
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| End bp | 1424115 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637976693 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_583461 |
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| Protein GI | 94310251 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.44634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0300258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGATCA ATCAGAGTTG TGTCGCTGTG CGGGTGATCG TGGTTTTTTC GGTCGCGTTA
TTTGCGATGG GCACTGCGAA GGCTACTGAC GTGTTCAATC TGGAGGGCTA TGGCCCCGTG
TCCCGCGCCA TGGGGGGCAC AGGCGTGGCG TACGACATTG GCGCGGCCGC CATGATGACG
AACCCGGCGA CGCTGGGCTT GATGGAGCAG GGGGCCTATC TAGATTTCGG GCTGGATGTC
ATCAACACCG ATATCAACAT ACGAAACGCC GCCACCGGGG AATCAGTTTC TTCTGGCAAT
CACGGCAACA ACAACGGCCC CTACTTCGCG CCCGAAGCCG CATTCGTGTA TCGGGCCGGG
AAGTATGCAT TCGGCGTGGG GGCCTTCGCG GGAGGGGGAC TCGGCACGCA GTACGGCGGC
AGCAGCTTTC TGTCGCGCAC GACCACCAAC GGCATCAACA CCGGCTTCGA CAATTTTTCG
CGTCTCCTGG TGTTGCGCAT TCCGTTTGCC ATGTCTTACG ACGTCACGGA CAAGCTGACG
GTCGGCGGCT CGCTCGACGC GGTCTGGACC TCGCTGAATC TCGGCATGCT GCTGGATGCC
TCGCAGATCG GTACGCTCGC GGCCCAGCAC CGCGCGTCCG GCACGCTGCT GCCCGCGCTC
GCCAGCGTGC CAGGCCTGTC GGGCGGGTAT ATCAACTCCG CGCATAACGG AATCGTGGGC
GGCGGTGCCG ATGCCTGGGG GATCGGCGGC AAGCTGGGCC TCACGTATCG CCTCACGCCG
GACACCGTGT TTGGCCTGGC CTACAACTTC AAGACGCGCG TGGGCGATCT GGGCGGCCAT
GCAACGTTGT CGGCAGTAAG TTCCGTTGCC GGAAACATCC CGCTCGACGG TCAGATCACG
GTCCACAGCT TCGAAATGCC CGCGCAGTTC ACGGCAGGTA TTAGTCACCG GTTAAACGAT
CACTGGAGCG TTTCGGCCGA CTATCAGCGC GTGTTTCTCG CGAGCGTGTT CAAGGACATC
AACGTGAGCT TCGTGCAGTC GGGCACGGGG GCGAACCTGA ACCTGTCGCT GCCGCAGAAC
TACCGTGACA TCAACGTGTT TGGCGTGGGG GCGGAATACC GCTACAACGC GAGCCTCGCG
TTCCGTGCGG GCTTCCATTA TGCGCAGGAA GCCATACCCA ACAATATGCT GTTGGCCGTC
ATTCCCGCCA TCCCGACCAC GACCCTGACC GGCGGCGTCT CTTATGCGTT CAGCCAAAAC
AGCAAGATCG ACCTCGGCAT ATCATTCGCA CTGCAGAAGA CCTTGACGAA CACGAGTCAG
CCCAACACCT CCGTGCCGAT AAAGGTGACC CACTCGCAGA TCAACGCAGC GGTGGCCTGG
CAAAAACGGT TTTGA
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| Protein sequence | MKINQSCVAV RVIVVFSVAL FAMGTAKATD VFNLEGYGPV SRAMGGTGVA YDIGAAAMMT
NPATLGLMEQ GAYLDFGLDV INTDINIRNA ATGESVSSGN HGNNNGPYFA PEAAFVYRAG
KYAFGVGAFA GGGLGTQYGG SSFLSRTTTN GINTGFDNFS RLLVLRIPFA MSYDVTDKLT
VGGSLDAVWT SLNLGMLLDA SQIGTLAAQH RASGTLLPAL ASVPGLSGGY INSAHNGIVG
GGADAWGIGG KLGLTYRLTP DTVFGLAYNF KTRVGDLGGH ATLSAVSSVA GNIPLDGQIT
VHSFEMPAQF TAGISHRLND HWSVSADYQR VFLASVFKDI NVSFVQSGTG ANLNLSLPQN
YRDINVFGVG AEYRYNASLA FRAGFHYAQE AIPNNMLLAV IPAIPTTTLT GGVSYAFSQN
SKIDLGISFA LQKTLTNTSQ PNTSVPIKVT HSQINAAVAW QKRF
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