| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1296 |
|---|
| Symbol | |
|---|
| ID | 4038099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1411714 |
|---|
| End bp | 1412451 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637976682 |
|---|
| Product | HupE/UreJ protein |
|---|
| Protein accession | YP_583450 |
|---|
| Protein GI | 94310240 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2370] Hydrogenase/urease accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00297181 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.49975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCC GCCTGCGGCG CTTCGCGTCT TCCCCCCGAA GGGGGGACGC ACCTGGTGGT
CCGGCGGAGC CGGTTCCAAG GGTGCCCTGG ACAAGACCGC CGCACCGCCA TGAACAGACA
ACGAGGAGAA CAACGATGAA GAAACAGACA GCGCGCGGCC TGATGGCCGC CACCTTGCTC
GCCGGCGTGG CCGGCGCCGC ACAGGCCCAC ACCGGCCACG GCACCAGCAG CCTGTTCGAA
GGCCTGGTGC ACCCCTTCGG TCCTGACCAC CTGCTGGCCA TGGTCGCCGT GGGTGTGTGG
TCGGTCTCGG CGCTGCCCGC GAACAAGGCC TGGCAAGGTC CGGCCGTGTT CCTGCTGGCG
CTCATTGCGA GCGCAACGCT GGGCATGCTC GGCGTGACGG TGCCGTACCT GGAGCACGGG
GTCTCGCTCT CCGTGGTGAT GTTCGGTGCC ATGCTGTTGC TCGCAGGGCG TGCCAGCGTG
CCACCCGCGG TGGGCCTGGG GCTGATCGCC GCAGCCGCTT CGCTGCACGG CCTGGCACAC
GGCTCCGAAA CGCCGGAGAG CGGTTTCGCC GGCTATGCGA TCGGCTTCCT GCTCACCACA
GCGGTGTTGC ACCTGGGCGG TGTCGGCATC GGCCTGGGCA TTCGGCGCTG GCTGGCCGAG
CGCAGCGGTT GGGTGCTCAG CGGCCTGGGC GCCATGCTGA GCGCGGCGGG CCTTTACCTG
TTCGGCCAGC TCGCCTGA
|
|---|
| Protein sequence | MSPRLRRFAS SPRRGDAPGG PAEPVPRVPW TRPPHRHEQT TRRTTMKKQT ARGLMAATLL
AGVAGAAQAH TGHGTSSLFE GLVHPFGPDH LLAMVAVGVW SVSALPANKA WQGPAVFLLA
LIASATLGML GVTVPYLEHG VSLSVVMFGA MLLLAGRASV PPAVGLGLIA AAASLHGLAH
GSETPESGFA GYAIGFLLTT AVLHLGGVGI GLGIRRWLAE RSGWVLSGLG AMLSAAGLYL
FGQLA
|
|---|
| |