Gene Rmet_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1295 
Symbol 
ID4038098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1410945 
End bp1411676 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID637976681 
Productnickel-dependent hydrogenase b-type cytochrome subunit 
Protein accessionYP_583449 
Protein GI94310239 
COG category[C] Energy production and conversion 
COG ID[COG1969] Ni,Fe-hydrogenase I cytochrome b subunit 
TIGRFAM ID[TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00118042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.526274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CATCCCCTTC CGCACGCACC AGCGCCGCCG ATCACGACGC GCTGGAATTG 
CAGCGAGGCC AGACCATCAA GTCCGTCTAC GTGTACGAAG TGCCGGTGCG CCTCTGGCAC
TGGATCAACG CGCTCGCCAT CACGGTCCTG TGCATCACCG GCTACTTCAT CGGCGTGCCG
CTGCCGACCA TGCCGGGCGA AGCCAGCGCG AACTACCTCA TGGGCTACAT CCGTTTTGCG
CACTTCGCGG CGGGCTACAT CATGGCCGTG GGCCTTCTGG GGCGGGCCTA CTGGGCGCTG
GTGGGCAACC ACCACGCCAA GGAGCTGTTC TGGGTGCCGG TGTTTCAAAA GGCCTACTGG
GTCCAGGCCT TCAACATGCT GCGCTGGTAC CTGTTCATGA TTCCCAAGCC GAACCAGTAC
GTGGGCCACA ACCCGCTGGC GCGCTTCGCC ATGTTCTTCG TGTACCTGAT GCTGTCGGTG
TTCATGGTCG TGACCGGCTT TGCGCTCTAC AGCGAAGGCG CGCAGGCCGG CTCCTGGCAA
GACCACCTGT TCGGCTGGGT GATCCCGCTC ATGGGCCAGA GCCAGGACGT GCACACCTGG
CACCGCCTGG GCATGTGGGG CATCGTGGTG TTCGTGATGC TGCACATCTA CGCGGCGATC
CGGGAAGACA TCATGGGCCG CCAGAGCATC GTGAGCACGA TGATTTCCGG TCACCGCACG
TTTAAAGAGT AA
 
Protein sequence
MSATSPSART SAADHDALEL QRGQTIKSVY VYEVPVRLWH WINALAITVL CITGYFIGVP 
LPTMPGEASA NYLMGYIRFA HFAAGYIMAV GLLGRAYWAL VGNHHAKELF WVPVFQKAYW
VQAFNMLRWY LFMIPKPNQY VGHNPLARFA MFFVYLMLSV FMVVTGFALY SEGAQAGSWQ
DHLFGWVIPL MGQSQDVHTW HRLGMWGIVV FVMLHIYAAI REDIMGRQSI VSTMISGHRT
FKE