| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1285 |
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| Symbol | |
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| ID | 4038088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1404829 |
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| End bp | 1405866 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976671 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_583439 |
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| Protein GI | 94310229 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.497783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGTCG TATGCGGATG CAGTGACAAC AGCCCGACTC ATGCGCGGCA TGTGCAACAG
GCCAGCGGTG AGCCCGGCGT GATCACGGTG AATCCGGCCA ATGGCGACCT TCACTTCGGC
GCCGGTGTGG CCCGCGTGTC GGTGCCGGGC ATGAGCCAGG AACGCGCCAT CAAACTGGAG
ACCGACATCC TGGGCGCCAA CAACCGTGTG GCACAGCAGA ACCGTGCCCA CTTCGAATTG
CATGGCGTGA CCGCGCTGAA CGTCGTCTCC AGCCCCGGCT CGGGCAAAAC CACGCTGCTG
TGCGCGACCA TCGAGGCGCT CAAAGCAAGG CAACCGGGCC TGCACGTGGC CGTGATCGAG
GGCGACCAGC AGACCAGCTT CGACGCCGAT CGCATCCGCG CGACCGGCGC ACCCGCCATC
CAGGTCAACA CAGGCAAAGG CTGTCACCTG GACGCGCCCA TGGTGGCCGA GGCGTTTGCG
AAGCTGCACA CGCATGAGCA TGCAGACGGG CATTCTCACG ACCATGTGCA TGACCGCCAC
GGCCATCACC ATGGTCATGG TCATGGTCAT GAGCACGATC ATCACCACCA CGGCGATGCC
CACAGTCTGC TGTTCATCGA GAACGTGGGC AATCTGGTCT GCCCCGCCAT GTGGGACCTG
GGCGAAGCCG CCAAGGTGGC CATCCTCTCG GTGACCGAGG GCGAGGACAA GCCGCTGAAG
TACCCCGACA TGTTCGCGGC CTCGCAGCTC ATGATCCTGA ACAAGACCGA CCTGCTGCCG
CACGTGAAGT TCGACGTGGC GCGCTGCATT GCCCTGGCGC GGCGCGTGAA CCCGGCCATC
GAGGTGATTC AGCTCTCGGC CACCACCGGC GAGGGCATGG ACGCGTGGTT GCACTGGCTG
GACCACGCGA TGAGTACCCA TCACCATCAT CACGACGAAA CGGTGTCCGA GGAAGCAGCA
CTGCGTGAGC GCGTGAAGCA GCTCGAAGCC GAGCTGGCCC GCGCGAAAGC AGTCCTGTCC
GCCAAGACCC CGATCTGA
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| Protein sequence | MCVVCGCSDN SPTHARHVQQ ASGEPGVITV NPANGDLHFG AGVARVSVPG MSQERAIKLE
TDILGANNRV AQQNRAHFEL HGVTALNVVS SPGSGKTTLL CATIEALKAR QPGLHVAVIE
GDQQTSFDAD RIRATGAPAI QVNTGKGCHL DAPMVAEAFA KLHTHEHADG HSHDHVHDRH
GHHHGHGHGH EHDHHHHGDA HSLLFIENVG NLVCPAMWDL GEAAKVAILS VTEGEDKPLK
YPDMFAASQL MILNKTDLLP HVKFDVARCI ALARRVNPAI EVIQLSATTG EGMDAWLHWL
DHAMSTHHHH HDETVSEEAA LRERVKQLEA ELARAKAVLS AKTPI
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