| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1272 |
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| Symbol | |
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| ID | 4038075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1394698 |
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| End bp | 1395645 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637976658 |
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| Product | phage integrase |
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| Protein accession | YP_583426 |
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| Protein GI | 94310216 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0100836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGA TCCACGAGTC TCTCGCCCAG TACGTGGCAG TCCGCCGTGC TCTCGGGGCG
TCATTCTATG AGCCTGCGTT GGCACTCGGT CATTTCGTTG ATCTGCTGGA ACGCGAAGGC
GCCGAGTTCA TTACAACCGA TCTGGCTCTG CGCTGGGCGA CGACGCCCGA ACTCGTCGAA
CGCGCTACGT GGGGGCGGCG CCTCTCTCAA GTGAGAGGAT TTGCCAGATG GATGAACGTG
ATTGACAGTC GAAACCAGAT TCCTCCAGCA GGACTCCTGA GTGCCCGCAG ACGGCGCAAC
GCCCCGCATA TTTACACTGA GCAGGAAATT GATCGGCTTA TGACCCGCGC CTCTCAACTG
CGATCCCGAA CTGGCATCCG AGCACTGACC TATTCGACGC TCATAGGGCT TCTTGTAGCG
ACGGGCCTCA GGCCAGGCGA GGCGCTCCGG CTCGACCGGT CCGACGTTGA CCTCGTCAGC
GGGATACTCT CCATTCGGGA ATCGAAGTTC GGCAAATCCC GCTTTGTTCC AGTAGCAGAG
TCTTCCCGGG TGGCGCTCGA ACACTATGCC CGGAAACGCG ATCAACTCTG TCCTGTACGA
TTGAGCGAAG CGTTCCTGGT TAGTGAGCAC GGCAAGCGAC TGAAGGCAGG CACTGCACGA
AGCATGTTCG TCAGAATGTC GCGCGCTGTT GGTCTGCGAT CGGCGACAGA GGGCGGGCGC
GATGGTTACG GCCCGCGCCT GCAGGACTTC CGGCATAGCT TCGCGACTGG AAGACTGGTC
GAATGGTATC GCGCCGGTCT GGACGTAAGT CGGGAATTGC CGAAACTTGC CGCCTACCTC
GGGCATGTCA ACATCGGCCT TACGTACTGG TATATCGAAT CGGTTCCTGA GTTGCTGGAA
CTCGCGGCAG CCTATCTCGA CAAGGACTGT CCGGGAGAAC GGACGTGA
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| Protein sequence | MTAIHESLAQ YVAVRRALGA SFYEPALALG HFVDLLEREG AEFITTDLAL RWATTPELVE
RATWGRRLSQ VRGFARWMNV IDSRNQIPPA GLLSARRRRN APHIYTEQEI DRLMTRASQL
RSRTGIRALT YSTLIGLLVA TGLRPGEALR LDRSDVDLVS GILSIRESKF GKSRFVPVAE
SSRVALEHYA RKRDQLCPVR LSEAFLVSEH GKRLKAGTAR SMFVRMSRAV GLRSATEGGR
DGYGPRLQDF RHSFATGRLV EWYRAGLDVS RELPKLAAYL GHVNIGLTYW YIESVPELLE
LAAAYLDKDC PGERT
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