Gene Rmet_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1269 
Symbol 
ID4038072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1391782 
End bp1392951 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID637976655 
Productmultidrug ABC transporter permease component 
Protein accessionYP_583423 
Protein GI94310213 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0236284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0534093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG CCACAATGCA CAAAGACGGG AGTGGCCCCC TGCAGACCGA CTTGCGCCGT 
TTTGATCTGC GGCGCTTGAT GGCACTGGTG ACCAAGGAAA GCTACCAGGC GCTGCGCGAC
CCCTCGACGC TGCTGATCGC GTTCGTGCTG CCGGTGGTGT TGGTGCTGCT GTTCGCCTAT
GCGGTGTCGC TGGATGCGAA GGATGTCCGT GTCGGCGTGG TCCTGGAGTC GCCCGGCGCA
TCGGCACAGT CGCTGGCCGC AGCGTTTTCG GGCACCCGCT TCCTGAATAC GCGCTTCGCC
CATGACCGGC GCGAAGTGGC CGACCAGCTG GTCTCCGGCG ACCTGCGCGG CTACGTGGTG
ATTCCGCAGG ATTTCGAGCA GCGTCTGGCC CAGCGTGGCA GCGAGCCGCT GGTGCAGATC
GTCACCGATG GCTCCTACCC CAATACCGCC AACTACGTCG AAAACTACGC CCGCGGCGTG
GTCCAGTCCT GGCGCGCTGG GCTGGATGTC GCGGCGCCCG CACAGGCCGT CATGCTGGAA
CCGCGCTACT GGTTCAACCC CGAGTTGGAA AGCCGCCGCG CACTGATTCC CGGCGCCATC
GCCATCGTCA TGACCATCAT CGGCACCATG CTGACTGCAC TGGTGGTGGC GCGTGAATGG
GAGCGCGGCA CCATGGAGGC GGTGCTGTCC ACGCCGGCCT CGGTGGCCGA AATCCTGATC
GGCAAGCTGC TGCCGTACTT CGTGCTCGGC ATGCTGTCCA CGCTGGGTGC GGCGGTGCTG
GCGGTGTTCG TGTTCGGCGT GCCGATGCGG GGCTCGCTGG CGGCGCTGCT GCTCCTGTCG
GCGGTGTTCA TGGTGCCGGC GCTGGGTCAG GGCCTGCTGA TTTCCTCCTT GGCACGCAAC
CAGTTCCTGG CCGCGCAGAT CGCGCTGTTC ACGGGTTTTC TGCCGGCTTT CATGCTGTCG
GGCTTTCTGT ATGAGATCGA GGCGATGCCC GCGCCAATCC GAGCCATCAC CCGGCTGGTT
CCGGCGCGTT ACTTCGTCGA TTCGCTGAAG ACGGTGTTCC TGGCCGGCGA CATCTGGGCG
GTGTTCCTGC CCAACCTGGC GGCCATGGCG GCGATCGGGG TGCTGTTCTT CGTGATCGCC
AAGCGCGCCA CGCGCAAGAA CCTGGAGTAA
 
Protein sequence
MNGATMHKDG SGPLQTDLRR FDLRRLMALV TKESYQALRD PSTLLIAFVL PVVLVLLFAY 
AVSLDAKDVR VGVVLESPGA SAQSLAAAFS GTRFLNTRFA HDRREVADQL VSGDLRGYVV
IPQDFEQRLA QRGSEPLVQI VTDGSYPNTA NYVENYARGV VQSWRAGLDV AAPAQAVMLE
PRYWFNPELE SRRALIPGAI AIVMTIIGTM LTALVVAREW ERGTMEAVLS TPASVAEILI
GKLLPYFVLG MLSTLGAAVL AVFVFGVPMR GSLAALLLLS AVFMVPALGQ GLLISSLARN
QFLAAQIALF TGFLPAFMLS GFLYEIEAMP APIRAITRLV PARYFVDSLK TVFLAGDIWA
VFLPNLAAMA AIGVLFFVIA KRATRKNLE