Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1269 |
Symbol | |
ID | 4038072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1391782 |
End bp | 1392951 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976655 |
Product | multidrug ABC transporter permease component |
Protein accession | YP_583423 |
Protein GI | 94310213 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0236284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0534093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCG CCACAATGCA CAAAGACGGG AGTGGCCCCC TGCAGACCGA CTTGCGCCGT TTTGATCTGC GGCGCTTGAT GGCACTGGTG ACCAAGGAAA GCTACCAGGC GCTGCGCGAC CCCTCGACGC TGCTGATCGC GTTCGTGCTG CCGGTGGTGT TGGTGCTGCT GTTCGCCTAT GCGGTGTCGC TGGATGCGAA GGATGTCCGT GTCGGCGTGG TCCTGGAGTC GCCCGGCGCA TCGGCACAGT CGCTGGCCGC AGCGTTTTCG GGCACCCGCT TCCTGAATAC GCGCTTCGCC CATGACCGGC GCGAAGTGGC CGACCAGCTG GTCTCCGGCG ACCTGCGCGG CTACGTGGTG ATTCCGCAGG ATTTCGAGCA GCGTCTGGCC CAGCGTGGCA GCGAGCCGCT GGTGCAGATC GTCACCGATG GCTCCTACCC CAATACCGCC AACTACGTCG AAAACTACGC CCGCGGCGTG GTCCAGTCCT GGCGCGCTGG GCTGGATGTC GCGGCGCCCG CACAGGCCGT CATGCTGGAA CCGCGCTACT GGTTCAACCC CGAGTTGGAA AGCCGCCGCG CACTGATTCC CGGCGCCATC GCCATCGTCA TGACCATCAT CGGCACCATG CTGACTGCAC TGGTGGTGGC GCGTGAATGG GAGCGCGGCA CCATGGAGGC GGTGCTGTCC ACGCCGGCCT CGGTGGCCGA AATCCTGATC GGCAAGCTGC TGCCGTACTT CGTGCTCGGC ATGCTGTCCA CGCTGGGTGC GGCGGTGCTG GCGGTGTTCG TGTTCGGCGT GCCGATGCGG GGCTCGCTGG CGGCGCTGCT GCTCCTGTCG GCGGTGTTCA TGGTGCCGGC GCTGGGTCAG GGCCTGCTGA TTTCCTCCTT GGCACGCAAC CAGTTCCTGG CCGCGCAGAT CGCGCTGTTC ACGGGTTTTC TGCCGGCTTT CATGCTGTCG GGCTTTCTGT ATGAGATCGA GGCGATGCCC GCGCCAATCC GAGCCATCAC CCGGCTGGTT CCGGCGCGTT ACTTCGTCGA TTCGCTGAAG ACGGTGTTCC TGGCCGGCGA CATCTGGGCG GTGTTCCTGC CCAACCTGGC GGCCATGGCG GCGATCGGGG TGCTGTTCTT CGTGATCGCC AAGCGCGCCA CGCGCAAGAA CCTGGAGTAA
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Protein sequence | MNGATMHKDG SGPLQTDLRR FDLRRLMALV TKESYQALRD PSTLLIAFVL PVVLVLLFAY AVSLDAKDVR VGVVLESPGA SAQSLAAAFS GTRFLNTRFA HDRREVADQL VSGDLRGYVV IPQDFEQRLA QRGSEPLVQI VTDGSYPNTA NYVENYARGV VQSWRAGLDV AAPAQAVMLE PRYWFNPELE SRRALIPGAI AIVMTIIGTM LTALVVAREW ERGTMEAVLS TPASVAEILI GKLLPYFVLG MLSTLGAAVL AVFVFGVPMR GSLAALLLLS AVFMVPALGQ GLLISSLARN QFLAAQIALF TGFLPAFMLS GFLYEIEAMP APIRAITRLV PARYFVDSLK TVFLAGDIWA VFLPNLAAMA AIGVLFFVIA KRATRKNLE
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