| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1259 |
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| Symbol | |
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| ID | 4038062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1379309 |
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| End bp | 1381414 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637976645 |
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| Product | hypothetical protein |
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| Protein accession | YP_583413 |
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| Protein GI | 94310203 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0627534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCAGC ACGCAGCGGC TTCGCCGCCG TGCCGCTTGT GGCGCGAGGC CCGCGCCAAT
GCAGGCATGT CCGCGTGCTT TGCACGACCG GACACGCCAG AGGTTGCAGA GGGCATAACC
ATGACCGACC GCCGCGATGA TGATTTCCGC ATCCGCCCCA GCGCCCCGAA GAACCGAGGC
CAGGGCTTCG TCTCCAAGGT GCTCAAGCAG GCGGGCAAGG CCAGCGGCGG CAAGTCCTCG
GTGCGCCGTC CTGGGACGAC TGGCGGCACC GGGAGGGGCA CCGTCCAGCG GCCCGGCTCG
CGCCTGGGTC GCGGCCACAC GGCGGCGCGC TTCGCGGGGG CGAAGCTCAC GCCCATGTCG
CGGCGCGTGA CCATCAAGAC GCTGCTGGTC AACCAGCGCC AGGCCAGTCC GCAGTCGCTC
GCCAAGCACC TGCGCTACAT CGAGCGCGAT GGCGTGGGCC GCGATGGCGA GCCGGGCCAA
GCCTACGGGC CGCAGACCGA TGCTGCCGAC CTCGACGGCT TCAAGGAACG CTGCGCGGAT
GACCGGCACC ACTTCCGCTT CATCCTCTCG CCCGAGGATG GCGCGGAACT CGAAGACCTG
CGCACCTACA CGCGGCATCT CATGGGCCGC ATGGAGGCCG ACTTGGGCAC GGGCCTCGAT
TGGGTGGCCG TGAACCACTG GAACACCGAC AACCCGCACA CGCACATCGT CGTGCGCGGG
CGCGACGACA CCGGCAAAGA CCTCATCATC GCGGGCGACT ACATCACCGA TGGTTTCCGC
CATCGCGCCG CCGAACTGGC AACCGAATGG CTGGGGCCGC GCACCGAGCT GGAGATCAAG
CAGACCTTGC AGCGCGAGGT GGAACAGGAG CGGTGGACGA GCCTCGACCG CACCCTCCAA
CGCGAGGCCG GCGAGGACGG CCGGGTGCAG ACCGAACGCT TCAACGAACC GATGCTGCAA
CGCCAGCGCC TGCCGCTGAT CGGCCGCCTG CAACGCTTGC AGCGCCTGGG CCTGGCCGAC
GAGCTGCGGC CGGGCACCTG GGTCGTCCAT GCCGACGCGG AGAAGACCCT GCGCGCCCTG
GGCGAGCGTG GCGACATCAT CCGCACCATG CAGCGAGCCA TGCGCGGCCA GCCGCGCGAG
CTGGCGGTGT TCGAGCCGGG CGACGACGAC CGCACCATTC TCGGCCGCGT GGCCGCGAAG
GGGCTGGCCG ACGAGCTGCG CGACCGGGGC TACCTGGTCA TCGACGGCGT GGACGGCAAG
GCCCACTACG TCGCGCTCAA CGCCCGCGAC GAGCTGGCGA ACTATCCGAC CGGCGCCGTG
GTGGAGGTCA AGGGTTCGGC CGACGTGCGC GCGGCCGACA AGAACATCGC TGCACTGGCG
AGCGATGGCC TGTATCGCAC CGATCATCAC CTGGCGATTG AGCAAGGCCG GGCCACGCAT
GGGCGCGATC CGCAGGAAAT CGTCGCGGCT CACGTTCGCC GCCTTGAAGC CCTGCGCCGG
GCCGGCATCG TGGAGCGCGT GGCCGAAGGT TTGTGGAAGG TGCCGGGCGA CCTGCCCGAG
CAGGGCCGCC GCTACGACGC GCAGCGCCTG GGCGGCGTGG CGGTGGAACT GAAATCGCAC
CTGCCTATCG AGCGGCAGGC CCGCGTGATG GGGGCCACCT GGCTCGACCA CCAACTGATC
GGCGGCGGCT CGGGCCTTGG CAACCTGGGC TTTGGCAGCG AGGCCAAACA AGCGATGCAG
CAGCGCGCCG ACTTCCTGGC CGAACAGGGG CTGGCCGAGC GCCGTGGGCA GCGCGTAATC
CTGGCCCGGA ACCTGTTGGG CACGCTGCGC AATCGGGAAT TGGCGCAGGC CGCCAAGGAC
ATTGCGGCCG AAACCGGCTT GGAGCACCGG CCCGTGTCCG ACGGCCAACG CGTGGCTGGC
ATCTACAGGC GTTCCGTCAT GCTCGCTAGC GGGCGCTACG CGATGCTCGA TGACGGCATG
GGGTTCAGCC TGGTGCCGTG GAAGCCGGTG ATCGAGCAGC GGTTGGGACA GCAACTCGCT
GCGACCATTC ACAAAGGATC GGCTTCCTGG GAACTCGGAA TTCGTCGAGG TATATCGATT
GGATAG
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| Protein sequence | MAQHAAASPP CRLWREARAN AGMSACFARP DTPEVAEGIT MTDRRDDDFR IRPSAPKNRG
QGFVSKVLKQ AGKASGGKSS VRRPGTTGGT GRGTVQRPGS RLGRGHTAAR FAGAKLTPMS
RRVTIKTLLV NQRQASPQSL AKHLRYIERD GVGRDGEPGQ AYGPQTDAAD LDGFKERCAD
DRHHFRFILS PEDGAELEDL RTYTRHLMGR MEADLGTGLD WVAVNHWNTD NPHTHIVVRG
RDDTGKDLII AGDYITDGFR HRAAELATEW LGPRTELEIK QTLQREVEQE RWTSLDRTLQ
REAGEDGRVQ TERFNEPMLQ RQRLPLIGRL QRLQRLGLAD ELRPGTWVVH ADAEKTLRAL
GERGDIIRTM QRAMRGQPRE LAVFEPGDDD RTILGRVAAK GLADELRDRG YLVIDGVDGK
AHYVALNARD ELANYPTGAV VEVKGSADVR AADKNIAALA SDGLYRTDHH LAIEQGRATH
GRDPQEIVAA HVRRLEALRR AGIVERVAEG LWKVPGDLPE QGRRYDAQRL GGVAVELKSH
LPIERQARVM GATWLDHQLI GGGSGLGNLG FGSEAKQAMQ QRADFLAEQG LAERRGQRVI
LARNLLGTLR NRELAQAAKD IAAETGLEHR PVSDGQRVAG IYRRSVMLAS GRYAMLDDGM
GFSLVPWKPV IEQRLGQQLA ATIHKGSASW ELGIRRGISI G
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