| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1252 |
|---|
| Symbol | |
|---|
| ID | 4038055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1374596 |
|---|
| End bp | 1375468 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976638 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583406 |
|---|
| Protein GI | 94310196 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5419] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0855009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTC GGGCCAAGAG TAAACCACGG CGTGAACCAA TTAACCAATC ATCAGGGACA
CGACACGTAG TTCTTCCGTG GCGGCGAGTC CTGTTCGCAG GAGGAGGCGT CATGGTCAAT
CTTCATCACT TCGCGCATTG GTATCCAACT GCGGCATACC TCTATGTTTT GTGGCTGGAT
GCGCTCTCGC TCGCTTGGGA ATATCTGCGC AGGCATCCCG ACTACCGGCT CGACTGGCTG
CGCCGTCATC GCCGGCCTGA AGCAGCGCAT CGCTGGGGCT TGCGCCTGCT GGAAGACCCG
GCCTTGGATG CGCGTGACGC GCATCCCGCT TGGCTGCCTG GTCATGCGGC CGTGGTGCAG
CTCTACCCCG ACGCCGATCC GCCGGAGGAC GCCACCGCCT TCGCGTTCTG GCGTATCCCT
GGCCACAAGC ACCTGCTCCA CGACGGCAAA GGGCTGGCGC TGATCGCACG CAGCCCAGGC
CATTGCCTGC GCTTCGCGCT CGCGCCCGGC CTGGAAGACG GCATGGCTGT CGCCTATGCC
CACCGCGGCA GCGCTGTCGC GGCTGCGCGC AACCAGCCGT CCAGCGTGGG CCTCGCTGTC
GTCAAACCCC GGCCCACATC CGCCGCGCTG CTGGAGCTGC ACACCTTGCA GGCGCTCGAC
GCGATTCTTG CGGGCGCGTC CTTGCGCGAT GTGGGCGAAG GGTTGTTCGG TGCCGACGCC
GTGGCCGATT GGTACAGCGA CGGCGGCCTG CGCTCCAAGG TGCGCCGCCT GGTACGGCGC
GGCGACGCGC TGATGCGCGG CGGCTATCGC CGCCTAGCAC AGCTTCCGCC GCTTGAGAAG
GGTCGTTTTG AGGACGACGC AAAACGGCCC TGA
|
|---|
| Protein sequence | MTSRAKSKPR REPINQSSGT RHVVLPWRRV LFAGGGVMVN LHHFAHWYPT AAYLYVLWLD
ALSLAWEYLR RHPDYRLDWL RRHRRPEAAH RWGLRLLEDP ALDARDAHPA WLPGHAAVVQ
LYPDADPPED ATAFAFWRIP GHKHLLHDGK GLALIARSPG HCLRFALAPG LEDGMAVAYA
HRGSAVAAAR NQPSSVGLAV VKPRPTSAAL LELHTLQALD AILAGASLRD VGEGLFGADA
VADWYSDGGL RSKVRRLVRR GDALMRGGYR RLAQLPPLEK GRFEDDAKRP
|
|---|
| |