| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1241 |
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| Symbol | |
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| ID | 4038044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1364828 |
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| End bp | 1365838 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637976628 |
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| Product | phage integrase |
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| Protein accession | YP_583396 |
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| Protein GI | 94310186 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.097797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACT TCAACCTTCC GTCGATCATT CACCGCTACT TTCTGGAGTA TTTGCCTCGG
CACAAGGGGC TGCAATCGAG CTCAATCCGC AGCTATCGGG ATAGCCTGCG CCTGTTCCTG
ATCTTTGTGG CGGGCACACA CCGGCTCGGC GTCAGCGAAC TGGTATTGGA GCACCTTGAT
TATCCCGCCG TGCAGGCGTT TCTGCACAGC ATGGAGGCCG ATCGAGGCAA CGCCATCAGT
ACCCGCAACC AGCGCTTGGC GGCACTTCAT GTGTTCTACG AATACGTGGG CCGGACCGTT
CCAGAGATGT TGCCTACCAG TGCCAAGGTC GCTGCCATCC CGATGAAGCG TTGCCCACGG
CCGGAGATGA CGTTCCTTGG ACGTGACGAG GTTCAAGCCA TGTTCGCCTG CATTCCTGCT
CAGCATCGCC TCTCATCACG GGATCGGGCG CTGCTTATGC TGCTCTACAA CACCGGCGCG
CGTGTTTCAG AGGTCGCGCA TCTGAAGGTC GAACAACTCG ACCTGCGCTC ACCTGCGCGC
GTCAGGCTAT TGGGCAAGGG GTCGAAGTGG CGCACGTGCC CACTCTGGAA CCAGACGGCC
AAGGCGCTGC AGGCGATGCT GGATGAGCGC GGAACGAACT TGCCTCCCGA ATCGCCGGTA
TTCGTTGGAG CTTCGCAGGC GCCGATGACC CGGTTCGGTA TTTACAAGCG CATCCGCCAC
TATGCCACGC TCTGGGAAGC ATCGGGGCAC ACAGCTTCCG CAGCCAAGGT AACGCCTCAC
GTATTTCGAC ACACCACAGC GGTTCATCTA CTTGAGTCGG GCGTGGAGGT CAATGTCATC
CGAGGCTGGC TGGGACATGT CAATCTGGAG ACGACCAATC GCTATGCGGA AATCACCATT
CGCATGAAGG CCGAAGCCCT GAAGTTGTGC GATCCGATCG TCGCAGGTGT TCCACGCAAA
CCCGCCTGGA AAGACGATGC TGCGATGATG GCCTGGCTGT CGTCCCTCTG A
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| Protein sequence | MKDFNLPSII HRYFLEYLPR HKGLQSSSIR SYRDSLRLFL IFVAGTHRLG VSELVLEHLD
YPAVQAFLHS MEADRGNAIS TRNQRLAALH VFYEYVGRTV PEMLPTSAKV AAIPMKRCPR
PEMTFLGRDE VQAMFACIPA QHRLSSRDRA LLMLLYNTGA RVSEVAHLKV EQLDLRSPAR
VRLLGKGSKW RTCPLWNQTA KALQAMLDER GTNLPPESPV FVGASQAPMT RFGIYKRIRH
YATLWEASGH TASAAKVTPH VFRHTTAVHL LESGVEVNVI RGWLGHVNLE TTNRYAEITI
RMKAEALKLC DPIVAGVPRK PAWKDDAAMM AWLSSL
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