| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1239 |
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| Symbol | |
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| ID | 4038042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1362583 |
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| End bp | 1363842 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637976626 |
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| Product | phage integrase |
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| Protein accession | YP_583394 |
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| Protein GI | 94310184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.183742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAC ATCACTTCCG GTCGCTTAAG GCGATCGACC GCGTCAGAGC CCAGTGGCTG
GGGCCACAGA TTGAACGCTA CGTGCAGTCG TTGGACGAAC TGCATACCAG CAATGCCACG
GTACGCCAGC ATATCCGCGC ACTTGGGCAC TTCAATGATT TTGTCATTGC CAGGGGTGTC
ACGAAGCTAG AAGCACTTCC CGACCATGTT GATGCCTTTG TCGAGTATTG GCACGCCGGT
CACGCAGGCT GGTGCAAGAA CAACCAGGAC CGAGCCGCTG TCACCGCACA GAGCCGTGTT
CCGGTGGAGC GGATGCTTTG CCTGGCCTTG CCGGATTACA CACGCCCGAA CAACCGGCCA
GCGATGCCGT TTGCCAATAC GGTTCCTGGT TTCTTGCCTT TCTTGAACGA TGAGAAGGGG
CTTCGTCAGG AGTCGCAGCA GCGCTACCTC TATACGCTTC GTCCTTTTGA AGCCTATCTG
AACAGGGGCG GCATTGCTTT GTCGGGATTG GAACCTGCCC ACATCAGCCG CTTTCTCGAA
GAACGCGCCA AGACACTGCA CAAGGCCGGC ATGCGAGACA CCGCCGGCGC CCTGCGCATC
TTCCTGCGTT ATCTGCATCG AGAAGGCATC GTGGCTACGG ATCTCGTACG TAGTGTGCCG
CGCGGCCGTA TCTACCGCCA AGCATCCATT CCACGCGCAA TTGGATGGCA GGATGTTGAG
CGGCTGCTGA CCAGCATCGA CCGCAGGTCC ATCTTGGGCA AGCGCGACTA CGCCATTCTG
ACGCTATTGG CCAGTTATGG GTTGCGCGCC AGGGAGATCG CTGCGCTGTG CCTGGACGAT
TTCGACTGGA CACATGCCCA GATCAGCATC CCAATGCGCA AGGGAGGCCA TTCGACGCGC
TATCCCTTGT CGGCCACAGT GGGCGATGCT GTGATTTCCT ACCTGCAAGC TCGGCGCAGT
GATGTTCCTC ACCGCCAAGT CTTTCTCACC GCCAGGTCTC CCTACATTCC CATGCGCCAC
TGGACCGTTT CGGCCATGGT TGGGATACGC ATGCGAGACA TCGGCATCCA AGTGACACGG
GCGGGCTCTC ACACACTGCG CCATGCCTGC GTGCAGCACC TCGTGGAAGC CGACATGCCC
TTCAAGGTCA TTGGTGACTA CGTAGGCCAT AGCCATCCGT CTTCCACGCT TGTCTATGGC
AAGGTGGCGG TACACAAGCT GCGTCAGATC GTCCTCTTCC AAGGGGAGGA CGTGCTATGA
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| Protein sequence | MLEHHFRSLK AIDRVRAQWL GPQIERYVQS LDELHTSNAT VRQHIRALGH FNDFVIARGV
TKLEALPDHV DAFVEYWHAG HAGWCKNNQD RAAVTAQSRV PVERMLCLAL PDYTRPNNRP
AMPFANTVPG FLPFLNDEKG LRQESQQRYL YTLRPFEAYL NRGGIALSGL EPAHISRFLE
ERAKTLHKAG MRDTAGALRI FLRYLHREGI VATDLVRSVP RGRIYRQASI PRAIGWQDVE
RLLTSIDRRS ILGKRDYAIL TLLASYGLRA REIAALCLDD FDWTHAQISI PMRKGGHSTR
YPLSATVGDA VISYLQARRS DVPHRQVFLT ARSPYIPMRH WTVSAMVGIR MRDIGIQVTR
AGSHTLRHAC VQHLVEADMP FKVIGDYVGH SHPSSTLVYG KVAVHKLRQI VLFQGEDVL
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