| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1237 |
|---|
| Symbol | |
|---|
| ID | 4038040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1360641 |
|---|
| End bp | 1361717 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583392 |
|---|
| Protein GI | 94310182 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4804] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.108175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC GCCGGTCATC CGCAGCGTCG TCCGCAGCGT CGTCCGCAGC GCCTTCGGCG
CTGCTGGGCG ACATTCGGGC ACTGATCGAG GCGGCGCGCA AGCGCGCCGC CTCGACGGTG
AATAGCGAGC TGACGATGCT CTACTGGCGC ATCGGCCAGC GCATCCGCAC GCAGGTCTTG
GACGGGCGCC GGGGCGCTTA TGGCAAGGAA GTCCTGCCTA CCCTGGCGGC GCAGTTGGTG
AAGGAGTACG GCAACAGCTT TGCCGAGCAG AACCTGCGCC GCATGGTGCA GTTCGCAGCC
ACCTTTCCCG ACGAGCAGAT TCTCGTATCA CTGATACGAG AATTGAGCTG GACGCACTTC
ATCGCCCTGA TCCCGCTGAA AGACCCGCTC CAGCGGGACT ATTACGCGCA GATGGCGAGC
GCCGAACGCT GGAGCGTGCG GACGCTGCGT GAGCGCATCG ACTCGATGCT GTACGAACGC
ACGGCGCTGT CCCAAAAGCC GGGCGAGACG ATCGCACAGG AGTTGGCGAA GATGCGCGAT
GCGCAGCGCA TGTCGCCCGC CCTAGTCATG CGCGACCCGT ACATCCTCGA CTTCCTGGGG
CTGCGGGACA CTTGGCAGGA AGGCGACTTG GAGGCGGCGA TCATCCGCGA AATGGAGTCG
TTCTTGTTGG AGCTGGGCGC GGGTTTCAGC TTCGTGGCCC GGCAGAAGCG CATCCAAATT
GACGGCGAGG ATTTTCACCT CGACCTGCTG TTTTACAACC GCAAGCTGCG GCGGCTGGTG
GCAGTGGAGT TGAAGGTCGA CGAGTTCAAG GCGGCTTTCA AGGGACAGAT GGAGCTTTAC
CTTCGCTGGC TGGACAAGCA CGAACGGGAG CCGGAGGAGG CCTCGCCGCT GGGGATCATC
CTTTGCACCG GCAAAAAGCG CGAGCAGATC GAATTGCTGG AGCTGGACAA GTCGGGCATC
CACGTCGCCG AGTATCTGAC TGCCTTGCCG CCGAGGGGTG TGCTGGTGGA GCGGCTGCAA
CAGGCAACGC AACGGGCGCA GTTGCAGATC GAGCAGCGCA AGACCGACAA CCAGTAG
|
|---|
| Protein sequence | MNTRRSSAAS SAASSAAPSA LLGDIRALIE AARKRAASTV NSELTMLYWR IGQRIRTQVL
DGRRGAYGKE VLPTLAAQLV KEYGNSFAEQ NLRRMVQFAA TFPDEQILVS LIRELSWTHF
IALIPLKDPL QRDYYAQMAS AERWSVRTLR ERIDSMLYER TALSQKPGET IAQELAKMRD
AQRMSPALVM RDPYILDFLG LRDTWQEGDL EAAIIREMES FLLELGAGFS FVARQKRIQI
DGEDFHLDLL FYNRKLRRLV AVELKVDEFK AAFKGQMELY LRWLDKHERE PEEASPLGII
LCTGKKREQI ELLELDKSGI HVAEYLTALP PRGVLVERLQ QATQRAQLQI EQRKTDNQ
|
|---|
| |