| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1236 |
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| Symbol | |
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| ID | 4038039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1359445 |
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| End bp | 1360644 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976623 |
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| Product | phage integrase |
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| Protein accession | YP_583391 |
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| Protein GI | 94310181 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.449507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.10874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TCAAGCTCAC CAAGACCGCC GTGGAGGCGG CCCAGCCCCA GGCCAAGGAT
GTTGAACTGC GGGATACCGT GGTGCCCGGC TTCCTGTGCA AGATTACCCC GACGGGCCGC
CGGGTGTTCA TGCTCCAGTA CCGCACGAAC TCCGGCCAGC CCCGCAAGCC CTCGCTGGGG
CTATACGGGG AGCTGACCGT CGAACAGGCA CGAGTCAAGG CACAGGACTG GCTGGCCGAG
GTTCGCCGGG GCGGCGACCC CGGCGGCGCC AAGGCCGAGG CGCGCAAGGC GCCCACGATG
GCCGAGTTGT GCAAGAAGTT CATGGAGGAC TACTCCAAGA AGCGCAACAA GCCCAGCACG
CAGGACGGCT ATCAGGGCGT CATCGACCGC AACATCATCC CGCTGCTGGG CCGCAAGAAG
GTGCATGACG TGAAGCGGCC CGACATTGCC GGGCTGATGG AGAAGCTGGC CTACAAGCCG
ACCGAGGCGA ACAAGACCTT CGGCGTGCTG CGCAAGATGT TCAACCTGGC CGAAGTGTGG
GGCTACCGCC CGGACGGCAC GAATCCGTGC CGCCACGTCC CGATGTACCC GCCGGGCAAG
GAAACCCGGC TCATCGTGGA CGAGGAAATG GTGCGGATCT TCCGTCATCT GGAGAAGCTG
GAGGCGGAAG GGCTGGAGAA CTACGTCATC CCGCTGGCGA TCCGGCTGCA ATTCGAGTTT
GCCGCCCGGC GCTCCGAAAT CTGCCCGCTC GAATGGAGCT GGCTGGACTT CGAGAACCGG
CGCGTGGTGT GGCCCGACAG CAAGGTCGGC GGCATTTCCA AGCCCATGAG CGAGGAAGCC
TATCGGCTGC TTTCGACGGC GCCGCGCCGG GAGGGCTGCC CCTATGTCCT GCCATCGCCC
AACGACTCGA CCAAGCACCT GACCTTTGGC GAGCACTATG GCGGCTGGTG CCGGGTGCTC
AAGGCCGCCG GCGTCCCGCA CGTCGGCACG CACGGCATCC GCCATCGCTC GACCACCGAC
ATAGCCAATT CCGGCGTGCC GACCAAAGTG GGCATGAAGT TAACGGGCCA CAAGACTGTG
GCGATGTTCA TGCACTACGT CCACACCGAG GACAAGCCGG TGCGCGATGC GGCCGAGCTG
GTGGCCAGCC GGCGCCAGGC CATCACGGGC GCGCGCCAGC TTGCGGAGGC GGCAGCATGA
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| Protein sequence | MAKIKLTKTA VEAAQPQAKD VELRDTVVPG FLCKITPTGR RVFMLQYRTN SGQPRKPSLG
LYGELTVEQA RVKAQDWLAE VRRGGDPGGA KAEARKAPTM AELCKKFMED YSKKRNKPST
QDGYQGVIDR NIIPLLGRKK VHDVKRPDIA GLMEKLAYKP TEANKTFGVL RKMFNLAEVW
GYRPDGTNPC RHVPMYPPGK ETRLIVDEEM VRIFRHLEKL EAEGLENYVI PLAIRLQFEF
AARRSEICPL EWSWLDFENR RVVWPDSKVG GISKPMSEEA YRLLSTAPRR EGCPYVLPSP
NDSTKHLTFG EHYGGWCRVL KAAGVPHVGT HGIRHRSTTD IANSGVPTKV GMKLTGHKTV
AMFMHYVHTE DKPVRDAAEL VASRRQAITG ARQLAEAAA
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