| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1226 |
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| Symbol | |
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| ID | 4038029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1346155 |
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| End bp | 1347348 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976613 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_583381 |
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| Protein GI | 94310171 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.15047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.127165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCA ATGCATCGCG CAGGCTATTG CCAGCCTGCC TCGCCGTCGC CACGCTGCTC
GCCACGGGGT CCGTGGCACT GGCCCAGAGT GCGCCGGCCA CATCCAGCAA GATCAAGGTC
GGCTTCATGC TGCCGTACAC GGGCACTTAT GCCGCCCTCG GCGGGGCCAT CGAGAATGGC
TTCCGGATGT ACGTGCAGGA GCAGGGCGGC AAGCTGGGCG GCCGCGAGGT TGAATACTTC
AAGGTCGATG ACGAGTCCGA TCCGGCCAAG GCGCCGGAAA ATGCCACCAA GCTGATCAAG
CGCGACCAGG TCGACGTGGT GGTCGGCACG GTTCATTCGG GCGTGCAAAT GGGCATCGTC
AAGGTGGCCA AGGAAAACAA TACGCTGCTG ATCATTCCCA ATGCCGGCGT GGACGAAGCC
ACCGGGCCGC TGTGCGGCTC CAACATCTTT CGTTCGTCGT TCTCGAACTG GCAGCCGGGC
TATGCAATGG GCCATGTGCT GGCGGATCGC GGCCTGAAGA AGGTGGTCAC GCTGACGTGG
AAATACGCAG CGGGCGAGCA GTCGGTCAAG GGCTTCAAGG AAGCGTTCGA AGCCAAGGGC
GGCAAGGTGG TGAAGGAGTT GAGCCTGCCG TTCCCGAACG TCGAATTCCA GGCGCTGATT
ACCGAAGTGG CTTCGATCAA GCCCGACGCC GTGTTCGTGT TCTTCGCCGG CGGCGGCGCG
GTCAAGTTCG TCAAGGACTG GCAGGCCGCC GGTCTCAAGG ACAAGATTCC GCTGTACGCA
TCAGGCTTCC TGACCGACGG CACGCTCGAG GCGCAGGGCG TCGCGGCGCA GGGTCTGGAG
ACCACGCTGC ACTATGCCGA TGGCCTGACC AATCCGCGCG ACAAGAGCTT CCGGCTCGAC
TACGCCAAGC TGTACAAGCT GCAGCCCGAC GTCTACGCGG TACAAGGCTA CGATGCCGCG
CAACTGCTGG CCGCTGGCGC CAATGCGGTC AAGGGCGACA TGTCGCGCAA GCCGGAGGTC
ATCAAGGCGA TGGAAGCCGC GAAGGTGGAT AGCCCGCGTG GCGCCTTCAC GCTGTCGAAG
GCGCACAACC CGGTGCAGGA CTTCTATCTG CGCAAGGTCG ATGGCCGCGA CAACAAGGTC
AGCAGCGTCG CCGTGAAGGC GCTGGCCGAT CCGGCGCGCG GCTGCCGCCT GTAA
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| Protein sequence | MHRNASRRLL PACLAVATLL ATGSVALAQS APATSSKIKV GFMLPYTGTY AALGGAIENG
FRMYVQEQGG KLGGREVEYF KVDDESDPAK APENATKLIK RDQVDVVVGT VHSGVQMGIV
KVAKENNTLL IIPNAGVDEA TGPLCGSNIF RSSFSNWQPG YAMGHVLADR GLKKVVTLTW
KYAAGEQSVK GFKEAFEAKG GKVVKELSLP FPNVEFQALI TEVASIKPDA VFVFFAGGGA
VKFVKDWQAA GLKDKIPLYA SGFLTDGTLE AQGVAAQGLE TTLHYADGLT NPRDKSFRLD
YAKLYKLQPD VYAVQGYDAA QLLAAGANAV KGDMSRKPEV IKAMEAAKVD SPRGAFTLSK
AHNPVQDFYL RKVDGRDNKV SSVAVKALAD PARGCRL
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