| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1222 |
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| Symbol | |
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| ID | 4038025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1340607 |
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| End bp | 1342283 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976609 |
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| Product | benzoyl-CoA-dihydrodiol lyase |
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| Protein accession | YP_583377 |
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| Protein GI | 94310167 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
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| TIGRFAM ID | [TIGR03222] benzoyl-CoA-dihydrodiol lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.677268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0150752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACA CCGCCCCCAT CGCATCCAGC GCCCCCGTCA CGTTCGAGCG CGATCCCGAG
CAATACCGTC ACTGGCAACT TACGTTCGAG GGCCCCGTCG CCACGCTGGC GATGAACGTC
GACGAGGAAG GCGGACTGCG CCCTGGCTAT GCGCTGAAGC TGAACTCCTA TGACCTGGGC
GTCGACATCG AACTGCACGA TGCCCTGCAG CGCATTCGCT TCGAACATCC GGAAGTGCGC
ACCGTCGTGA TGACGAGCAC GAAAGATCGC ATCTTCTGCT CGGGCGCCAA CATCTTCATG
CTCGGCAAGT CCAGCCACGC CTGGAAGGTC AACTTCTGCA AGTTCACGAA CGAGACCCGC
AACGGTATCG AGGACGCCAG CCTCCACTCG GGCATCAAGT TCATCGCCGC CTGCAACGGC
ACCACGGCGG GCGGCGGCTA CGAGCTGGCG CTGGCCTGCG ACGAGATCGT GCTGGTCGAC
GACCGCTCCT CGGCCGTGAG CCTGCCCGAA GTGCCGCTGC TGGGCGTGCT GCCGGGCACC
GGCGGCCTGA CGCGCGTCAC CGACAAGCGC CATGTGCGCC GCGACCACGC CGACATCTTC
TGCCTGACCA CCGAAGGGGT GCGCGGGCAA CGCGCCAAGG ACTGGAAGCT TGTCGACGAG
GTGGTCAAAC CCGCACGCTT TGCCGAATAC GTGCGCGAAC GCGCGCAGGC GCTGGCCGCC
CAGAGCGACC GCCCCGCCGA TGCACAGGGC GTGAGACTGA CGCCACTGAC GCGCACCGTG
ACGCCCGAAG GCTATCGGTA CGAAACCGTA CGCGTCGACA TCGACCATGA GTCACGCCGC
GCAACGATCA CCGTGTCGGC GCCCGACGTC GGTCAACCCC GGGATCTGGC CGGCATCCTC
GCCGCCAGCG CCCAGTGGTG GCCGCTCAAG ATGGCGCGCG AGCTAGACGA CGCCATCCTG
ACGCTGCGCA CCAATCATCT CGATATCGGC ATGTGGATCC TCAAGACCAC CGGCGATGCC
GCACAGGTGC TGGCGGCCGA TGCGCTGATG GATGCGCACG CCAGCCACTG GTTCGTGCGC
GAGACGATCG GCATGCTGCG CCGCACGCTG GCGCGCCTGG ATGTGTCGTC GCGCAGTCTG
TTCGCGCTGG TGGAACCGGG CTCCTGCTTT GCCGGCACGC TGCTGGAACT GGTGCTGGCC
GCGGACCGCG CCTACATGCT GCAACTGCCC GACACGCCGG ACGAAGCTCC TCGCGTTCAT
GCCGACGTCG CCAACTTCGG CCGCTATCCG ATGCCGAACG GCCTGACGCG CCTGGCCGCA
CGCTTCTATG AAGATGTCGA CGCCATCGTC GCCGTGCGCG AACAGGCCGG CAAGCCGCTA
GACGGCCCCG CCGCCGAAGC ACTTGGCCTG ATCACGGCCG CGCTCGACGA CATCGACTGG
GAAGACGAAA TCCGTATCGC CACCGAGGAA CGCGCGAGTC TGTCCCCCGA CGCCCTGACC
GGTCTGGAAG CCAACCTGCG CTTCGGCGGG CGAGAAACGA TGGAAACGCG CATTTTCGGG
CGCCTGACGG CCTGGCAGAA CTGGATCTTC AACCGGCCCA ACGCGGTCGG CGAACACGGC
GCGCTCAAGG TATTCGGCAC CGGTAACAAG GCACGCTTCG ACTGGGATCG GGTCTGA
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| Protein sequence | MSDTAPIASS APVTFERDPE QYRHWQLTFE GPVATLAMNV DEEGGLRPGY ALKLNSYDLG
VDIELHDALQ RIRFEHPEVR TVVMTSTKDR IFCSGANIFM LGKSSHAWKV NFCKFTNETR
NGIEDASLHS GIKFIAACNG TTAGGGYELA LACDEIVLVD DRSSAVSLPE VPLLGVLPGT
GGLTRVTDKR HVRRDHADIF CLTTEGVRGQ RAKDWKLVDE VVKPARFAEY VRERAQALAA
QSDRPADAQG VRLTPLTRTV TPEGYRYETV RVDIDHESRR ATITVSAPDV GQPRDLAGIL
AASAQWWPLK MARELDDAIL TLRTNHLDIG MWILKTTGDA AQVLAADALM DAHASHWFVR
ETIGMLRRTL ARLDVSSRSL FALVEPGSCF AGTLLELVLA ADRAYMLQLP DTPDEAPRVH
ADVANFGRYP MPNGLTRLAA RFYEDVDAIV AVREQAGKPL DGPAAEALGL ITAALDDIDW
EDEIRIATEE RASLSPDALT GLEANLRFGG RETMETRIFG RLTAWQNWIF NRPNAVGEHG
ALKVFGTGNK ARFDWDRV
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