Gene Rmet_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1205 
Symbol 
ID4038007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1324582 
End bp1325367 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID637976591 
ProductIclR family transcriptional regulator 
Protein accessionYP_583360 
Protein GI94310150 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0230361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.161906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CAGACAAGTC ACCCGGCAAG ACCTCGATCC AGGTGATCGA GCGCATGATG 
ACGCTGCTGG ACGCGCTGGC CCAGCACGCC GACCCCGTCA GTCTGAAAGA GCTTTCGCTG
GCCACCGGCC TGCACCCGTC CACGGCCCAC CGGATTCTGA ACGACATGGT GGCGTGCCGC
TTTGTCGACC GCTCCGATCC GGGCAGCTAT CGACTGGGTA TGCGGCTGCT CGAGCTGGGC
AATCTGGTCA AGGCACGCCT TTCGGTGCGT GACGCTGCAC TGGCACCAAT GCGTGCCCTG
CACCGCGTCA CCGGCCAGAC CGTCAACCTG TCGGTACGTC AGGGCGACGA AATCGTCTAC
ATCGAGCGCG CCTACAGCGA GCGCTCGGGG ATGCAGGTGG TGCGTGCCAT CGGCGGCCGC
GCCCCGCTGC ACCTGACCTC GGTCGGCAAA CTGTTCCTGG CCGCGGACGA AGGCGCGCGT
GTACGCAACT ACGCCACCCG TACCGGACTG GCCGGCCATA CGCGCACGTC GATCACGGAC
ATCTCCAAGC TCGAACGCGA ACTGACCTGG GTGCGCTCGA ATGGCTACGC ACGCGATAAC
GAGGAACTGG AACTCGGCGT CCGCTGTATC GCCGCAGGCA TCTATGACGA CTCGCGGCGC
CTTGTCGCCG GCCTGTCACT CTCTGCCCCG GCCGATCGGC TTCAGGATAG CTGGCTGCAG
AACCTCAAGG ACACCGCGCT GCAGATCTCG CGTGGCATGG GATATGTCCC CGAGCCTACA
GCTTGA
 
Protein sequence
MAEADKSPGK TSIQVIERMM TLLDALAQHA DPVSLKELSL ATGLHPSTAH RILNDMVACR 
FVDRSDPGSY RLGMRLLELG NLVKARLSVR DAALAPMRAL HRVTGQTVNL SVRQGDEIVY
IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADEGAR VRNYATRTGL AGHTRTSITD
ISKLERELTW VRSNGYARDN EELELGVRCI AAGIYDDSRR LVAGLSLSAP ADRLQDSWLQ
NLKDTALQIS RGMGYVPEPT A