Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1203 |
Symbol | |
ID | 4038005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1322299 |
End bp | 1322994 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637976589 |
Product | nitroreductase |
Protein accession | YP_583358 |
Protein GI | 94310148 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000186245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.254827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCC CTGGTGACGC AGCGATCGTC GATCGCGCCA TCACAACGCG CCGTTCGATC CGCGCATTCC TGGATACGCC GGTACCACGC GAGACCGTCG AGGAGATTCT TGCGGTGGCA AGCCGCGCAC CCTCCGGTAC CAACACCCAG CCGTGGAAGG TGTATGTGCT GGCCGGCGAT GCCAAGGCCC GCCTGTGTGC GGATGTGCTG GCCGCGTACG AGGATCCCGA GCGTGATGCC AAGTACCGAG AGGAATATCC GTACTACCCG CGCGAGTGGA CCAATCCGTA TCTGGCGCGC CGCCGCAAGG TTGGTTGGGA TCTTTACAGC CTGTTGCAGA TCAGCCGCGA AGACAAGGCG CGCATGCACG AACAACATGC GCGCAATTTC CGTTTCTTTG ATGCCCCTGT AGGCATGATC TTCACGATTG ATCGGATCAT GGAACAAGGA AGCTGGCTCG ATTACGGCAT GTTCCTGCAA AGCATCATGG TGGCGGCGCG CGCACGTGAC CTGGATACGT GCCCGCAGGC CGCCTTTACG CAGTTCCACA GGATCATTGG GCAACACTTG CGTTTGCCGG AGGAAGAGAT GGTGGTGTGT GGCATGTCGC TTGGATATGC CGACCCCGAG GCTACGGCCA ATCAATTGAC GACGGAACGT GAACCGGTCA GCGGGTTCGC GCGTTTTCTT TCCTGA
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Protein sequence | MSTPGDAAIV DRAITTRRSI RAFLDTPVPR ETVEEILAVA SRAPSGTNTQ PWKVYVLAGD AKARLCADVL AAYEDPERDA KYREEYPYYP REWTNPYLAR RRKVGWDLYS LLQISREDKA RMHEQHARNF RFFDAPVGMI FTIDRIMEQG SWLDYGMFLQ SIMVAARARD LDTCPQAAFT QFHRIIGQHL RLPEEEMVVC GMSLGYADPE ATANQLTTER EPVSGFARFL S
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