| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1201 |
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| Symbol | |
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| ID | 4038003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1320742 |
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| End bp | 1321713 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976587 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_583356 |
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| Protein GI | 94310146 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000329608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.582651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAT TCAGGCACTT TCCGGGCCGC TCATCCTGCC CCATCCCGAT GCTTGCCTTT
TACGCCGATC ATTTCGTCCT GCCGTTGCCG CCGGGTCACC GTTTTCCGAT GCGCAAATAC
AGCATGCTGC GTGATGCGGT GGTGCGCGAG GTAGGCGGGG TGGAACTGCA AGAGGCGCCG
CGTGCCGACG ATGCAACACT CGCATTGGCC CACACCGCTG CCTATATCGA GGACGTTTCC
ACTGGCCAAC TCGATGCCGC GCGTCAGCGC GAGATCGGCT TTCCCTGGTC GCATGAAATG
GTGGAGCGTT CCCGGCGCTC GGCCGGCGCG ACGATTGCCG CTTGCAGGGT GGCGCTGGAG
CAGGGTATCG CGGCGAATCT GGCTGGCGGC ACTCACCACG CGTACGCGGA CAAAGGGGCG
GGGTTTTGCG TATTCAATGA CGCGGCGATT GCGGCGCGTC GCCTGCAGCG CGACGGCAGC
GTCCGGCGTG TGGCGGTCAT CGATCTCGAC GTCCACCAGG GCAACGGTAC CGCATCGATC
CTGCGTGATG ACCCGACGAT ATTTACGCTG TCGCTGCATG GCGAGAAGAA CTACCCGTTT
CGCAAGGAAG CTAGCGATCT CGACGTCGGG TTGCCGGATG GGTGCGATGA CGGTACCTAT
GCCGTCGCGC TGGCGTCCGC GCTAGAAACC CTGTTCGCAC GATTCGATCC CGATCTGCTG
ATCTACCTGG CCGGCGCCGA TCCTCATGAG GGTGATCGCC TGGGGCGATT GAAGCTCACG
ATGGCCGGTC TCGCGCAGCG AGACAGCATG GTGTTCGAAG CGGCACGATC GCGTGGGTTG
CCGGTCGCCG TTGCCATGGC GGGTGGCTAT GGCAACCAGA TCGAGGACAC GGTCGCCGTG
CATACGCAGA CCATCATGCT TGCCGCGCGG TATCACGCAC AGCTTGCCGC CGAACGCGCG
AGCGTGTCAT GA
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| Protein sequence | MMSFRHFPGR SSCPIPMLAF YADHFVLPLP PGHRFPMRKY SMLRDAVVRE VGGVELQEAP
RADDATLALA HTAAYIEDVS TGQLDAARQR EIGFPWSHEM VERSRRSAGA TIAACRVALE
QGIAANLAGG THHAYADKGA GFCVFNDAAI AARRLQRDGS VRRVAVIDLD VHQGNGTASI
LRDDPTIFTL SLHGEKNYPF RKEASDLDVG LPDGCDDGTY AVALASALET LFARFDPDLL
IYLAGADPHE GDRLGRLKLT MAGLAQRDSM VFEAARSRGL PVAVAMAGGY GNQIEDTVAV
HTQTIMLAAR YHAQLAAERA SVS
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