| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1197 |
|---|
| Symbol | |
|---|
| ID | 4037999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1315368 |
|---|
| End bp | 1317032 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976583 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_583352 |
|---|
| Protein GI | 94310142 |
|---|
| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00531613 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.708438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG CGATTGAAAT CAAGGTGCCG GATATCGGCG ACTACGACGC CGTTCCCGTC
ATCGAAGTGC ACGTGAAGCC GGGCGACACG ATCAACGCGG AAGACGCGCT GGTGACGCTG
GAATCCGACA AGGCCACCAT GGACGTGCCG TCGCCGCAGG CCGGCACGGT CAAGGAAGTC
CGGATCAAGG TGGGCGATAG CGTTTCCGAA GGCTCCGTGC TGGTGATGCT CGAGCCCGCA
GGCGCCGCTG CCGCCGCTCC GGCTCCCGCA GCCGCTGCTG CTCCGGCAGC TCCGGCCCCT
GCCGCCGCGG CACCCGCGCC GGCGGCTCCC GCTGCCCCGG CTCCGGCCGC TGCCCCTGCT
GGTGGTGGCA CGGTCGAGGT CAAGGTGCCC GATATCGGCG ACTACGACGC CGTGCCGGTC
ATCGAAATCC ACGTCAAGGT GGGTGACCAG ATCAACGCCG AAGACGCGTT GGTGACGCTG
GAGTCCGACA AGGCCACCAT GGATGTGCCG TCGCCGCAGG CCGGCACGGT CAAGGAAATC
AAGGTCAAGG TCGGTGATAA CGTCGCCCAA GGCACGCTGA TCCTGATCCT GGAAGCTGCT
GGCGGCGCTG CCGCAGCAGC TCCGGCCCCG GCAGCCGCCC CGGCGCCTGC CGCAGCCGCT
CCCGCGCCCG CACCGGCGGC CGCGGCGCCG GCACCTGTTG CCGCGCCGGC CGTCGCGCCA
GCGGTGCAGG GTACGACCGG CAAGGCCGCT CACGCCAGCC CGACCGTGCG CAAGTTCGCG
CGCGAGCTGG GTGTCGACGT GTCGCGTGTG CCGGGCACCG CTCCCAAGGG CCGCATCACG
CAGGAAGACG TGCAGAACTA CGTCAAGAGC GTCATGAGCG GCCAGACTGC CACGCCGTCC
GCACCGGCTG CCGCCGCCGG CACCGGCGTG GGCCTGGACC TGCTGCCGTG GCCGAAGGTG
GACTTCACGC GCTTTGGCGA AGTGGAGTCG AAGCCGCTGT CGCGCATCAA GAAGATCTCT
GGCGCCAACC TGCATCGCAA CTGGGTCATG ATCCCTCACG TCACGAACTG TGACGAAGCG
GACATCACCG AGCTCGAGGC ATTCCGCGTG CAGCTCAACA AGGAAAACGA GAAGGCTGGC
ATCAAGGTGA CGATGCTTGC GTTCATGATC AAGGCCACCG TTGCGGCGCT CAAGAAGTTC
CCGAACTTCA ACGCCTCGCT GGACGGCGAC AACCTGGTGC TGAAGAAGTA CTTCAACATC
GGTTTCGCGG CCGACACCCC GAACGGTCTG GTCGTGCCGG TGATCAAGGA CGCCGACAAG
AAGGGCGTGC TCGAGATCAG CCAGGAAATG AGCGATCTGG CCAAGCTGGC GCGCGACGGC
AAGCTGAAGC CTGACCAGAT GCAAGGCGGC TGCTTCTCGA TCTCGTCGCT CGGCGGCCTC
GGTGGCACGT ACTTCACGCC GATCATCAAT GCGCCGGAAG TGGCCATCAT GGGCGTGTGC
AAGTCGTATA TGAAGCCGGT GTGGGACGGC AAGCAGTTCG CCCCGCGCCT GACGCTGCCG
CTGTCGCTGT CGTGGGATCA CCGCGTGATC GACGGTGCCG AGGCCGCACG CTTCAACACG
TACTTCGCGG CGCTGCTGGC GGATTTCCGC CGGATTCTGC TGTAA
|
|---|
| Protein sequence | MSQAIEIKVP DIGDYDAVPV IEVHVKPGDT INAEDALVTL ESDKATMDVP SPQAGTVKEV
RIKVGDSVSE GSVLVMLEPA GAAAAAPAPA AAAAPAAPAP AAAAPAPAAP AAPAPAAAPA
GGGTVEVKVP DIGDYDAVPV IEIHVKVGDQ INAEDALVTL ESDKATMDVP SPQAGTVKEI
KVKVGDNVAQ GTLILILEAA GGAAAAAPAP AAAPAPAAAA PAPAPAAAAP APVAAPAVAP
AVQGTTGKAA HASPTVRKFA RELGVDVSRV PGTAPKGRIT QEDVQNYVKS VMSGQTATPS
APAAAAGTGV GLDLLPWPKV DFTRFGEVES KPLSRIKKIS GANLHRNWVM IPHVTNCDEA
DITELEAFRV QLNKENEKAG IKVTMLAFMI KATVAALKKF PNFNASLDGD NLVLKKYFNI
GFAADTPNGL VVPVIKDADK KGVLEISQEM SDLAKLARDG KLKPDQMQGG CFSISSLGGL
GGTYFTPIIN APEVAIMGVC KSYMKPVWDG KQFAPRLTLP LSLSWDHRVI DGAEAARFNT
YFAALLADFR RILL
|
|---|
| |