| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1192 |
|---|
| Symbol | |
|---|
| ID | 4037994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1306839 |
|---|
| End bp | 1307696 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976578 |
|---|
| Product | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase |
|---|
| Protein accession | YP_583347 |
|---|
| Protein GI | 94310137 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000194196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC ACCTGATCGA CGGTAACGCC CTTGCCAAAC AAATCCGCGC CGAGGCCGCC
CAGCGCGCTG CCCGCCTGAC CGCGGCCGGC CACCAGCCCG GCCTGGCCGT GGTGCTCGTG
GGCGAGGACC CCGCCAGCCA GGTCTATGTG CGCAACAAGG TGAAGGCGTG CGAGGACAAC
GGATTCTATT CGTCGCTGAA CCGCTACCCG GCCGACCTGT CCGAAGCCGA CCTGCTGGCC
CGCATCGACG AACTGAACAA CGACCCGAAG ATCCACGGGA TCCTGGTCCA ACTGCCGCTG
CCCAAGCATA TCGACAGCCA CAAGGTGCTC GAAGCCATCG CCCCGGAAAA GGACGTCGAC
GGCTTCCACG TGGCCAACGC CGGCGCGCTG ATGACCGGCG CCCCCCTGTT CCGCCCCTGC
ACGCCGTACG GCTGCATGAA GATGCTCGAA TCGATCCAGT ACCCGCTGCG CGGCGCGCGT
GCCGTGGTGG TGGGTGCCTC GAACATCGTC GGCAAGCCGA TGGCCATGAT GCTGCTGCAG
GCTGGCGCAA CCGTAACGAT CTGCAATAGC AAGACGCGCG ACCTCGCCGC CCATACGCGC
GACGCCGACG TGATCGTCGC TGCCGTGGGT CGCCGCAACA TCATTACTGC CGACATCGTC
AAGCCGGGCG CCGTGGTGAT CGACGTAGGC ATGAACCGTG ACGACGCCGG CAAGCTGTGC
GGCGATGTGG ACTTCGCCGG TGTGCGCGAA GTGGCCGGCC ATATCACCCC GGTTCCGGGT
GGCGTCGGCC CGATGACGAT CACGATGCTG CTGATCAACA CGCTGGAAGC CGCGGAACGC
GAAGCCGGCA TCGCCTGA
|
|---|
| Protein sequence | MSAHLIDGNA LAKQIRAEAA QRAARLTAAG HQPGLAVVLV GEDPASQVYV RNKVKACEDN
GFYSSLNRYP ADLSEADLLA RIDELNNDPK IHGILVQLPL PKHIDSHKVL EAIAPEKDVD
GFHVANAGAL MTGAPLFRPC TPYGCMKMLE SIQYPLRGAR AVVVGASNIV GKPMAMMLLQ
AGATVTICNS KTRDLAAHTR DADVIVAAVG RRNIITADIV KPGAVVIDVG MNRDDAGKLC
GDVDFAGVRE VAGHITPVPG GVGPMTITML LINTLEAAER EAGIA
|
|---|
| |