| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1181 |
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| Symbol | |
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| ID | 4037981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1290312 |
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| End bp | 1295183 |
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| Gene Length | 4872 bp |
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| Protein Length | 1623 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976565 |
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| Product | glutamate dehydrogenase (NAD) |
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| Protein accession | YP_583336 |
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| Protein GI | 94310126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.137841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGG AAAACGAAGA AAAGGTTGCG CAGTTGCTGG ATGAGTTGGT CGCGTTCGCG
CACGAACGGC TGCCGGCTGC GACGTTCGGG ATCGTCGAAC CCCTGCTGCG GCACTACTAC
GACCTGGCCG ATGGCGAGGA CCTGCTCGCA CGCAACGTGG CCGATCTCTA CGGCGCCGTC
ATGGCGCACT GGCAGACGGC GCAGAAGTTC GTGCCGGGCA CCGCTCGATT GCGCGTCTAC
AACCCGAACC TCGAGGAACA CGGCTGGCAC TCGGACCACT CCATTGTCGA GATCGTCAAC
GACGACATGC CGTTCCTGGT CGATTCGGTC ACCACGGAGA TCAACCGGCA CGGACTGACG
CTGCACTCGG CCATCCACCC GGTCTTTCGC GTCTGCCGCG ACACGCGCGG CGGCATCGAG
AGCATCGGCC TTGGCGGGGG CGAGATGGGC GCCACCAACT GCCGGCTCGA ATCGTTCATC
CATTTCGAAG TCGACCGCAC AGGCGAGGCC ACGCAACTCG AAGCCTTGCG CAATGCCATC
GCGCGCGTCC TCGGCGATGT GCGGGTAGCC GTGGAAGACT GGCCGCGCAT GCAACAGATT
GCGCGCGACA CAATCGGCGG CATGGCCCAG GCCCCAGATG CCGCCACGCC GGAGTCGGTG
GAAGCACGCG CGTTCCTGGA ATGGATGCTG GACGACCACT TCACGTTCCT CGGGCATCGC
GACTACGAGC TGATCTCGCG CGATGGCCAG TTCTGGCTGC GCGGCGTGCC CGGCTCCGGC
GCGGGCATTC TGCGCGAGGC CCTGCGCGAC CCTGCGGCGG AAGACCTCAC GTCCCTGCCC
GCGGCCGCCC GCAGCGTCAT CGAAGGCGCC ACGCCGATCT TCCTGACCAA GGCCAATTCG
CGCGCCACGG TGCATCGACC CGGCTACCTC GACTACGTCG GGGTCAAGCT GCTAGACGCT
AACGGCAAGC TGTTCGGCGA ACGCCGTTTC GTGGGCCTGT ACACGTCCAC GGCCTACATG
GTCAGCACCA GCGAGATCCC GCTGGTACGC CGCAAGTGCG CCAACATCCT GTCGCGCGCC
GGCTTCCTGA CAAAGGGCCA TCTGTACAAG TCCTTGATCA CCATCCTGGA ACAGTACCCA
CGCGACGACA TGTTCCAGGC CGACGAAGAC GAGCTGTTCG ACATCACACT CGGCATCCTG
CGGCTGCAGG AACACCAGCG CACGCGCCTG TTCGTTCGGC GCGACCGCTT CGACCGCTTC
ATCTCCTGCC TGGTGTTCGT ACCGCGCGAC AAGTACAACA CCGACCTGCG CCAGCGCATC
CAGAAGTTGC TGATGCAGGC GTTCAACGGC ACGGGCTGCG AATTCACGCC ACTACTGTCC
GAATCCCCGC TGGCACGTAT CCAGATCACG GTGCGCGGGC AGCCCGGCAC GATGCCGGAG
GCCGATACCC GCGAGCTCGA AGAGCGGATC GTGCAGGCCA CGCGCCGCTG GCAGGACGAC
CTGTCCGCCG CGCTGCACGA GACGCGCGGA GAGGAGCACG GCAACAGGTT GCTGCGCCGC
TATGGCGACT CGTTCCCGGC AGGCTATCGC GAGGACTATC CCGCGCGTAC CGCCGTGCGC
GATATCGAAC TGATGGAGCA CGCGCGCCAG CATCCGAACG GACTGGCCAT GAACCTGTAT
CGCCCGATTG AAGCCGCCCC TGGCGCGTTC CGCTTCAAGG TATTCCGCGC CGGCCTGCCG
ATCGCGCTGT CGGCAAGCCT GCCCATGCTC GAACACCTGG GCGTGCGCGT CGACGAGGAA
CGTCCCTATC TGATCGAACC CGACGCCGGC GACCCGATAT GGATCCACGA CTTCGGCCTG
GAGATCGCCG CCGACCATGA GGGCCAGCCA GTCGATATCG AGATCGAGCG CGCCAAGCCG
CTGTTCGAAG ACGCTTTCGG ACGCGCCTGG AATGGCGAGA TCGAGAACGA CGACTTCAAC
CGGCTGGTGC TGCGGGCGGG CCTTGCCGCG CGGGACGTGA CGATCCTGCG CGCCTACGCC
AAGTACCTGC GCCAGGTGGG CTCCACGTTC AGCAATGCCT ATATCGAACA GGCGCTGGCG
GCAAACCCGC GTATCGCGGC GATGCTGGTC TCGCTGTTCG TCTCCCGCTT CGACCCGGCC
GTTGCCGCCG CCGGCACACC CGACGATGCC CGCTGCCGCA AGCTGCTGGC CGATATCGAA
TCCGCGCTCG ACCAGGTGCC GAATCTCGAC GAGGATCGCA TCCTGCGGCT GTTCCTCAAC
GTAATCAGCG CAACTGTGCG CACCAATTAC TTCCATCACG ACGCGGACGG TCATCCACGC
CCCTACATTT CGTTCAAGTT CAATCCGGCG CTGGTACAGG GGCTGCCCGA GCCGCGACCG
ATGTTCGAGA TCTGGGTCTA CTCGCCACGG GTGGAGGGCG TGCACCTGCG CGGCGGACGC
GTGGCGCGTG GCGGATTGCG ATGGTCGGAC CGGCGCGAGG ATTTCCGCAC CGAGGTGCTG
GGCCTGATGA AGGCGCAGAT GGTCAAGAAC ACGGTCATCG TGCCGGTCGG CTCGAAGGGC
GGCTTCGTCG TCAAGCGGCC GCCGCCGCCC ACCGATCGCG ATGCGTTCCT CGCCGAAGGC
GTGGCCTGCT ACCAGACCTT CCTGCGCGGC CTGCTCGACC TGACCGACAA CCTCGTCTCC
GGCAACCTCG TGCCGCCACC CGAGGTGGTG CGTCATGACG ATTCGGACCC ATACCTCGTG
GTGGCAGCCG ACAAGGGCAC GGCTACGTTC TCGGACTATG CGAACGCCAT CTCGGCCGAA
TACGGTTTCT GGCTCGACGA CGCCTTCGCC TCCGGTGGAT CGGTTGGCTA CGACCACAAG
AAGATGGGCA TCACCGCGCG CGGCGCGTGG GAAAGCGTCA AGCGGCACTT TCGGGAAATG
GGCACCGATA TCCAGGCCAC GCCGTTCACG GTGGTCGGCG TTGGCGACAT GTCTGGCGAC
GTGTTCGGCA ACGGCATGCT GCTATCTCCC CACATCAAAC TCGTGGCCGC GTTCGACCAT
CGCCATATCT TCCTTGACCC GGATCCGGAC TGCGCGAAGA GCCTGGCCGA GCGCGCGCGC
ATGTTCGATC TGCCGCGTTC GAGCTGGGCC GATTACGACG CCACGCTGAT TTCCGCAGGT
GGCGGCATCT ATCCACGCAC AGCCAAGACG ATCGCGCTCT CGCCGCAGGT ACAGGCCGTG
CTCGGCATCA CGGCGGCATC GCTGCCTCCC GCCGAATTGA TCCACGCGAT CCTGATGGCA
CCGGTGGATC TGCTCTACAA CGGCGGCATC GGCACCTACG TCAAGGCGAG TACCGAAACC
CACCAGCAAG CCGGCGATCG CGCCAACGAC CCGGTACGTG TCAACGGCAA CGAACTGCGC
TGCAAGGTGG TGGGCGAAGG CGGGAACCTC GGTTTCACCC AGCTCGGGCG TATCGAGTTT
GCCCGCCACG GCGGCCGTAT CAATACGGAT GCCATTGACA ATTCCGCCGG CGTCGACTGC
TCCGACCACG AGGTGAATAT CAAGATCCTG CTTGGCATCG TAGTGGCCGA TGGCGAGATG
ACCGAGAAGC AACGCAACAA GCTGCTGGCC GAGATGACCG ACGAGGTTGG CCTGCTGGTG
CTGCAGGACA ATTACTTCCA GACCCAGGCG CTCTCGGTCG CGGGCCGCGT GGCGCCGGTG
CTGGTCGATG CCGAAGCGCG GCTGATCCGC TGGCTGGAAC GCGCGGGCCG TCTCAACCGG
CCGCTCGAGT TTCTGCCCAC GGACGAGGAC ATCACCGAAC GCAAGGCGCT GGGCGCCGGG
CTGACATCAC CCGAACGCGC GGTGCTGCTG GCCTACAGCA AGATGTGGCT CTACGACGAA
CTGCTTGCGT CCGATATCCC CGAGGATGTG CTCGTGGCCG GGCTGCTGGC CGACTACTTC
CCGCAGCCGC TACGCCAGCG CTACGCGGAG GCCATGCAGC GCCATCCGCT GCGGCGCGAG
ATCCTGGCCA CGCACCTGAC CAACATGCTG GTGAACCGCG TCGGTGCCAC GTTCGTCCAT
CACCAGATGG AGGAAACCGA CGCGCGGCCC GCTGACATCG TGCGCGCCTG TCTGCTGGCC
CGCGATGTGT TCGGGCTTAC CGGGCTATGG GAACGGATCG ACGGGCTCGA CAATCGCGTC
GAAGACGCCG TGCAGGCGCG CATGTTCGGC GATCTGGCGC GGCTGCTCGA ACGCGCCACG
CTCTGGTTCA TCCGCTATCT GCGCGCGGGC GGTACCGTGG AGCCGGGCGC AGCCAGGTTC
GTCGATGCGG CGCATTGGCT CACGCCACAA TTGCCGACGC TGCTGCCGCC CGAGCCATCG
CAGGCCATGG CCGAACGCGC CATGGCCCTG ACCGAAGCCG GCGTCGACGA AGATCTGGCG
CTACGTGTGG CGGCCAGCGA TATCGCGGCG GCGGCGCTCG ACATCGCGGA GGTCTCTGGA
ACATGTGGCC GCAGCCTTGG CGCCGTGGCA GGGGTCTACT TCGCCCTGGA CACCGAACTC
AACTTCGGAT GGCTGCGCGA GCGCGCGTTG TCTCTACCCG CGGAGACGCA CTGGGATCTG
CTGGCACGCA CGACTACGCT CGACGACCTG GGTCGGCTCA AGCGGGCGTT GACGACGAGT
GTGCTGGGCC AGTCGCGCGA CACGGATGAC CCACAGGCGC TCATCGAGGG CTGGCGCGGC
ACCCGTCAGG CGGCGCTGGA TCGCTATGCC CAGATGCTGG CCGACCAACG CGCCTCGGGC
GTTTCAGGCG TGGCGGCCTT GTCGATGCTG TCGGTCGCGG TCAGGGAGAT TGGCTTGCTC
GAACGCGCCT GA
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| Protein sequence | MPPENEEKVA QLLDELVAFA HERLPAATFG IVEPLLRHYY DLADGEDLLA RNVADLYGAV
MAHWQTAQKF VPGTARLRVY NPNLEEHGWH SDHSIVEIVN DDMPFLVDSV TTEINRHGLT
LHSAIHPVFR VCRDTRGGIE SIGLGGGEMG ATNCRLESFI HFEVDRTGEA TQLEALRNAI
ARVLGDVRVA VEDWPRMQQI ARDTIGGMAQ APDAATPESV EARAFLEWML DDHFTFLGHR
DYELISRDGQ FWLRGVPGSG AGILREALRD PAAEDLTSLP AAARSVIEGA TPIFLTKANS
RATVHRPGYL DYVGVKLLDA NGKLFGERRF VGLYTSTAYM VSTSEIPLVR RKCANILSRA
GFLTKGHLYK SLITILEQYP RDDMFQADED ELFDITLGIL RLQEHQRTRL FVRRDRFDRF
ISCLVFVPRD KYNTDLRQRI QKLLMQAFNG TGCEFTPLLS ESPLARIQIT VRGQPGTMPE
ADTRELEERI VQATRRWQDD LSAALHETRG EEHGNRLLRR YGDSFPAGYR EDYPARTAVR
DIELMEHARQ HPNGLAMNLY RPIEAAPGAF RFKVFRAGLP IALSASLPML EHLGVRVDEE
RPYLIEPDAG DPIWIHDFGL EIAADHEGQP VDIEIERAKP LFEDAFGRAW NGEIENDDFN
RLVLRAGLAA RDVTILRAYA KYLRQVGSTF SNAYIEQALA ANPRIAAMLV SLFVSRFDPA
VAAAGTPDDA RCRKLLADIE SALDQVPNLD EDRILRLFLN VISATVRTNY FHHDADGHPR
PYISFKFNPA LVQGLPEPRP MFEIWVYSPR VEGVHLRGGR VARGGLRWSD RREDFRTEVL
GLMKAQMVKN TVIVPVGSKG GFVVKRPPPP TDRDAFLAEG VACYQTFLRG LLDLTDNLVS
GNLVPPPEVV RHDDSDPYLV VAADKGTATF SDYANAISAE YGFWLDDAFA SGGSVGYDHK
KMGITARGAW ESVKRHFREM GTDIQATPFT VVGVGDMSGD VFGNGMLLSP HIKLVAAFDH
RHIFLDPDPD CAKSLAERAR MFDLPRSSWA DYDATLISAG GGIYPRTAKT IALSPQVQAV
LGITAASLPP AELIHAILMA PVDLLYNGGI GTYVKASTET HQQAGDRAND PVRVNGNELR
CKVVGEGGNL GFTQLGRIEF ARHGGRINTD AIDNSAGVDC SDHEVNIKIL LGIVVADGEM
TEKQRNKLLA EMTDEVGLLV LQDNYFQTQA LSVAGRVAPV LVDAEARLIR WLERAGRLNR
PLEFLPTDED ITERKALGAG LTSPERAVLL AYSKMWLYDE LLASDIPEDV LVAGLLADYF
PQPLRQRYAE AMQRHPLRRE ILATHLTNML VNRVGATFVH HQMEETDARP ADIVRACLLA
RDVFGLTGLW ERIDGLDNRV EDAVQARMFG DLARLLERAT LWFIRYLRAG GTVEPGAARF
VDAAHWLTPQ LPTLLPPEPS QAMAERAMAL TEAGVDEDLA LRVAASDIAA AALDIAEVSG
TCGRSLGAVA GVYFALDTEL NFGWLRERAL SLPAETHWDL LARTTTLDDL GRLKRALTTS
VLGQSRDTDD PQALIEGWRG TRQAALDRYA QMLADQRASG VSGVAALSML SVAVREIGLL
ERA
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