Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1159 |
Symbol | |
ID | 4037957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1267354 |
End bp | 1269582 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976541 |
Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
Protein accession | YP_583314 |
Protein GI | 94310104 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.123492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACAT CGACGGAGCT GACGGGGCAG ACCGCGGGCG TGCCCGACGC CGGGCTCGTC GAGCGCGCGC TCGCGTATGT GCGCGAGAAG GCCGACGGCG AGAAACCCAC GACACTGCCC ACCGGCGAGA CCGTGCTGTC TCACGCCGAG GGGATGCTGC GTATCCTGGA TGGCCTGCGC GTGGACGATG CCGCGCGTGC GGCGGCGTGC CTGTTCCCGA TGGTGGCGTT TGTGCCCGGC GTCGAGGCGC ACATCGAGGA GCGCTTCGGC GAGGACGTGG CGCGGCTGGT GAAGGGCGTG CGGCAACTGT TGCGGATTGG CGCGATCGCC ACGCAGGCCG AGGCCGTCGA AACGTCGAAG TCGCAGGCGG CGGCGCGGCA GGAGCAGGTG GAGGCGCTGC GCAAGATGCT GCTGGCCTTC GCGCAGGACA TCCGTGTGGT GCTGGTGCGG CTGGCTTCGC GTCTGCAGAC GTTGCGCTGG CTGGCGCAGA CCAAGAGCCA GCCGCTGCCA GGCGTGGCGC GCGAAACGCT CGATATCTAC GCGCCGCTGG CGAACCGGCT GGGTATCTGG CAGATGAAGT GGGAGCTCGA GGATCTGGCC TTCCGCTTCG AGCAGCCCGA GACCTACAAG CGCATCGCCA AGCTGCTCGA CGAAAAACGC ATCGAGCGAG AGGGCTATAT CTCGCAGGCG ATCGCGCGGC TGCAGTCCGA GCTGGCGGCG GCGGGCATTC GCGCCGAAGT GACCGGGCGA CCCAAGCACA TCTACAGCAT CTGGAAGAAG ATGCGGGGCA AGGCGCTCGA TTTCGCCGAT CTCTACGACG TGCGCGCCTT CCGCGTGATC GTCGACGACA TCAAGGACTG CTATACGGTG CTCGGTATCG TGCACCACAT CTGGCAACCG ATTCCGCGCG AGTTCGACGA CTACATTTCG CGGCCGAAGG CGAATGGCTA CAAATCCCTG CACACGGTGG TGATCGGCGA CGATGGCCGA GCGTTCGAGG TGCAGATCCG TACGCACGAG ATGCACCACT TCGCCGAGTA CGGCGTGGCG GCGCACTGGC GCTACAAGGA GGCGGGTGGC AAGGGCTATA GCGGTCAGTT CACGGCGGAC AACAGCTACG ACGAGAAAAT CGCGTGGCTG CGGCAACTGC TGGCGTGGAA GGATGATGCC GATCATACGG TCACGCACGA GGATTCGCCG TGGGAGCAGC TCAAGCACGC AGCAATCGAC GACCACATCT ATGTGCTGAC GCCGCAGGCG CGTGTGGTGG CGTTGCCCCA GGGCGCCACG CCGGTGGATT TTGCCTACTA CCTGCATAGT GACCTCGGTC ATCGTTGCCG CGGTGCGCGC GTCGATGGCG CGATGGTGCC GCTCAACACG CCGCTCAAGA ACGGGCAGAC CGTGGAGATC GTGGCGGTCA AGCAGGGTGG GCCATCGCGT GACTGGCTGA ACCCCGAGCT GGGCTACCTG GCCAGCAGCC GCGCGCGCGC CAAGGTGCGT GCATGGTTCA ATGCACTCGA CTCTCAGGAG ACGATTGCCC AAGGGCGCGC CCTGATCGAA AAGACGTTGC AGCGCGAGGG GAAGACGGCG GTCAATCTCG ACGATCTCGC CACCCGACTC AACTTCAAGA CACCCGATGA TCTGTTCGCG GCGGTGGCGA AGGAAGAGTT CAGCCTGCGC CACGTGGAGC AGGCGCTGCG GCATCCGGAC GGGGAAGTGC AGCCGCAGTT CAGCGAGGAA GAGGCCGTTA CCAAGAAGAG TCGCGCCACC AGCGTGGCGC GCGGCGCCAA GAGTGGCGTG CTCGTGGTGG GCGTCGATTC GCTGATGACC CAAATGTCTC GCTGCTGCAA GCCGGCGCCG CCGGACGATA TCGTTGGCTT CGTGACTCGT GGTCGGGGTG TGTCGATCCA TCGACGCAAC TGCCACACGT TCCAGCAACT GTCGACGCGA GACCCCGAGC GGGTGATCCA GACGGAGTGG GGCAAGCGCA GCGATGCCGT GTATCCCGTG GACATCCAGG TGGAGGCGAT CGACCGGCAA GGCTTGCTGC GCGATATTTC CGAAGTGCTT TCGCGCGAAA AGATCAACGT CACGGGTGTG AAGACGCTGT CGAGCAAGGG TGTCGCTCGA ATGCAGTTCA CGGCGGAGGT TGCCGAGGCC ACGCAACTTC AGCGTGCGAT TTCCCTGATC GAAGAAGTGC AGGGGGTGTT GCACGCGAAA CGAAAATAA
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Protein sequence | MVTSTELTGQ TAGVPDAGLV ERALAYVREK ADGEKPTTLP TGETVLSHAE GMLRILDGLR VDDAARAAAC LFPMVAFVPG VEAHIEERFG EDVARLVKGV RQLLRIGAIA TQAEAVETSK SQAAARQEQV EALRKMLLAF AQDIRVVLVR LASRLQTLRW LAQTKSQPLP GVARETLDIY APLANRLGIW QMKWELEDLA FRFEQPETYK RIAKLLDEKR IEREGYISQA IARLQSELAA AGIRAEVTGR PKHIYSIWKK MRGKALDFAD LYDVRAFRVI VDDIKDCYTV LGIVHHIWQP IPREFDDYIS RPKANGYKSL HTVVIGDDGR AFEVQIRTHE MHHFAEYGVA AHWRYKEAGG KGYSGQFTAD NSYDEKIAWL RQLLAWKDDA DHTVTHEDSP WEQLKHAAID DHIYVLTPQA RVVALPQGAT PVDFAYYLHS DLGHRCRGAR VDGAMVPLNT PLKNGQTVEI VAVKQGGPSR DWLNPELGYL ASSRARAKVR AWFNALDSQE TIAQGRALIE KTLQREGKTA VNLDDLATRL NFKTPDDLFA AVAKEEFSLR HVEQALRHPD GEVQPQFSEE EAVTKKSRAT SVARGAKSGV LVVGVDSLMT QMSRCCKPAP PDDIVGFVTR GRGVSIHRRN CHTFQQLSTR DPERVIQTEW GKRSDAVYPV DIQVEAIDRQ GLLRDISEVL SREKINVTGV KTLSSKGVAR MQFTAEVAEA TQLQRAISLI EEVQGVLHAK RK
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