Gene Rmet_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1158 
Symbol 
ID4037956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1266975 
End bp1267337 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID637976540 
Productendoribonuclease L-PSP 
Protein accessionYP_583313 
Protein GI94310103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0195416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA ACACCCTGAA GCGCGCCCAC GTGGGCAAGC GTCTGTCCGA ATACGCGGTC 
TACAACGGCG TGGTCTATCT GGCCGGCCAG GTGCCCGAGG TCGACCCCAA GGCCGACCTG
CGCGGCCAGA CGCGTGAGGT GCTGGGCCAT ATCGACCGCC TGCTGGCTGA AGCCGGCAGC
GACAAGACAC GCATCCTGAT GTGTCAGATC TTCCTGACGG ACATCACGCG CATTGGCGAG
ATGAACGAGG TGTGGGACGA GTGGGTGGCG CAAGGCAATA CACCGCCGCG GGCCACCGTC
CAGGCGGCGC TGGCCAATCC CGACTACCTG ATCGAAGTGG TGGTGACGGC CGCGCTCAAC
TGA
 
Protein sequence
MSTNTLKRAH VGKRLSEYAV YNGVVYLAGQ VPEVDPKADL RGQTREVLGH IDRLLAEAGS 
DKTRILMCQI FLTDITRIGE MNEVWDEWVA QGNTPPRATV QAALANPDYL IEVVVTAALN