Gene Rmet_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1156 
Symbol 
ID4037954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1265104 
End bp1265880 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID637976538 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_583311 
Protein GI94310101 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG GCAAGACGGC ACTGGTCACT GGATCGACCA GCGGTATCGG ACTCGGCATC 
GCCCAAGCGC TAGCCGCGCA AGGTGCGAAC ATCATTGTCA ACGGATTCGG TGACGTGGAC
GGCGCAAAGG CGGAGATCGC CAAATCCGGC AGCGGCATTC AGGTTGGCTA CCACGGCGCC
GACATGAGCA AGGCTGCCGA GATCGAGGAC ATGATGCGCT ATGCCGAGAA GGACTTCGGC
GGCGTGGACA TCCTGGTCAA TAACGCAGGC ATCCAGTTCG TGGCGAAGAT CGAGGAATTT
CCGGTCGATC GCTGGGACGC GATCATCGCC ATCAATCTCA CCTCCGCATT CCACACCACC
CGCCTGGCCC TGCCCTCGAT GAAGGCGAAG AACTGGGGGC GGGTCATCAA TATCGCCTCG
ACCCACGGTC TCGTGGCATC GGCGGAAAAG TCGGCCTACG TGGCCGCGAA ACACGGCATC
GTCGGCTTCA CCAAGGTCAC CGCGCTCGAA ACGGCGCAGA CCGGCGTCAC GGCCAATGCC
ATCTGCCCGG GCTGGGTGCT GACGCCACTG GTACAGAAGC AGGTGGAAGC CCGCGCCCAG
AAGGAAGGGA TTCCGGTCGA GCAAGCCAAG CGCGAACTGG TGATCGAGAA GCAGCCTTCC
GGCCAGTTCG TCACGCCCGA GGAACTCGGC GCGCTGGCGG TGTTCCTGTC GAGCGAAGCC
GCGCGTCAGG TGCGCGGCGC GATCTGGAAC ATGGACGGCG GCTGGGTGGC CCAATAA
 
Protein sequence
MLKGKTALVT GSTSGIGLGI AQALAAQGAN IIVNGFGDVD GAKAEIAKSG SGIQVGYHGA 
DMSKAAEIED MMRYAEKDFG GVDILVNNAG IQFVAKIEEF PVDRWDAIIA INLTSAFHTT
RLALPSMKAK NWGRVINIAS THGLVASAEK SAYVAAKHGI VGFTKVTALE TAQTGVTANA
ICPGWVLTPL VQKQVEARAQ KEGIPVEQAK RELVIEKQPS GQFVTPEELG ALAVFLSSEA
ARQVRGAIWN MDGGWVAQ