Gene Rmet_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1154 
Symbol 
ID4037952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1263838 
End bp1264476 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID637976536 
Productbutyryl-CoA:acetate CoA transferase 
Protein accessionYP_583309 
Protein GI94310099 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGA CACGTGATGA AATGGCCGCG CGCGCGGCCC GGGAACTGCA GGACGGTTTC 
TATGTGAACC TCGGTATCGG CCTGCCGACG CTGGTGGCCA ACCACGTGCC GGAAGGCATG
GAAGTGTGGC TGCAGTCGGA GAACGGCCTG CTGGGCATCG GCCCGTTCCC GACCGAGGAA
GAAGTGGACG CCGACATGAT CAATGCGGGC AAGCAGACGG TGACGACGCT GCCCGGGTCG
TCGATCTTCT CGTCGGCCGA TTCGTTCGCG ATGATTCGCG GCGGCAAGAT CAACCTCGCC
ATCCTGGGCG CCATGCAGGT CAGCCAGCGC GGCGACCTGG CCAACTGGAT GATCCCGGGC
AAGATGGTCA AGGGCATGGG CGGCGCGATG GACCTCGTGG CCGGCGTGGG TCGTGTGGTG
GTGCTGATGG AGCATACCGC CAAGAAAAAG GATGGCACCG AGGACATCAA GATCCTTGAG
GCGTGCAATC TGCCGCTGAC TGGTGTGGGT GTGGTGAATC GCATCATCAC CGACCTGGCC
GTGATGGACG TGACGCCGGA AGGCCTGAAG CTGGTGGAAA CCGCCCCGGG CGTGAGCCGG
GAGGAAGTGC AGGCGAAGAC GGGTACGAAA CTGATCTGA
 
Protein sequence
MAWTRDEMAA RAARELQDGF YVNLGIGLPT LVANHVPEGM EVWLQSENGL LGIGPFPTEE 
EVDADMINAG KQTVTTLPGS SIFSSADSFA MIRGGKINLA ILGAMQVSQR GDLANWMIPG
KMVKGMGGAM DLVAGVGRVV VLMEHTAKKK DGTEDIKILE ACNLPLTGVG VVNRIITDLA
VMDVTPEGLK LVETAPGVSR EEVQAKTGTK LI