Gene Rmet_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1152 
Symbol 
ID4037950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1262387 
End bp1262932 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content63% 
IMG OID637976534 
ProductLuxR family transcriptional regulator 
Protein accessionYP_583307 
Protein GI94310097 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCA TCGACTACCA GACCGCTTTC CAGCTTGCGC CCGTCGGGCT GGTGCTGTCG 
CGCGCCCGCA TGATCGAGGA TTGCAATGAC GAGGTTTGCC GGATCTTCGG CACCACGCGC
GATGCCCTGG TCGGCGAGTC CTTCCAGGTG CTCTACCCCA CCGCCGACGA GTTCGAGCGA
ACCGGTGCGC GGATCGTGCC AATCATGAAT GCAAAGGGGA TGTACTCGGA CGAGCGGATC
ATGAAGCGCG CCAACGGCGA GCTGTTCTGG TGCCATGTCA CCGGCCGCGC GCTGGACCGG
CAGGATCCAC TCGGCAGCGG CATCTGGACG TTCGAAGATC TATCCCAGAA GCGGCCCGTA
ACAGCCGAGC TGACCGCGCG GGAGCGCGAT ATCGCCGCGC AGCTGGTCGA GGGCAAAACC
AGCAAGCAGA TCGGCAAGCT GCTGGCAATC AGCCCACGCA CGGTGGACAT CTACCGGGCA
CGTCTGATGA AGAAATATGG CGCGCATACG GCGGTGGATC TGGTCCAACG CCTTGTCAAT
CACTGA
 
Protein sequence
MPSIDYQTAF QLAPVGLVLS RARMIEDCND EVCRIFGTTR DALVGESFQV LYPTADEFER 
TGARIVPIMN AKGMYSDERI MKRANGELFW CHVTGRALDR QDPLGSGIWT FEDLSQKRPV
TAELTARERD IAAQLVEGKT SKQIGKLLAI SPRTVDIYRA RLMKKYGAHT AVDLVQRLVN
H