Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1152 |
Symbol | |
ID | 4037950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1262387 |
End bp | 1262932 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976534 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_583307 |
Protein GI | 94310097 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCCA TCGACTACCA GACCGCTTTC CAGCTTGCGC CCGTCGGGCT GGTGCTGTCG CGCGCCCGCA TGATCGAGGA TTGCAATGAC GAGGTTTGCC GGATCTTCGG CACCACGCGC GATGCCCTGG TCGGCGAGTC CTTCCAGGTG CTCTACCCCA CCGCCGACGA GTTCGAGCGA ACCGGTGCGC GGATCGTGCC AATCATGAAT GCAAAGGGGA TGTACTCGGA CGAGCGGATC ATGAAGCGCG CCAACGGCGA GCTGTTCTGG TGCCATGTCA CCGGCCGCGC GCTGGACCGG CAGGATCCAC TCGGCAGCGG CATCTGGACG TTCGAAGATC TATCCCAGAA GCGGCCCGTA ACAGCCGAGC TGACCGCGCG GGAGCGCGAT ATCGCCGCGC AGCTGGTCGA GGGCAAAACC AGCAAGCAGA TCGGCAAGCT GCTGGCAATC AGCCCACGCA CGGTGGACAT CTACCGGGCA CGTCTGATGA AGAAATATGG CGCGCATACG GCGGTGGATC TGGTCCAACG CCTTGTCAAT CACTGA
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Protein sequence | MPSIDYQTAF QLAPVGLVLS RARMIEDCND EVCRIFGTTR DALVGESFQV LYPTADEFER TGARIVPIMN AKGMYSDERI MKRANGELFW CHVTGRALDR QDPLGSGIWT FEDLSQKRPV TAELTARERD IAAQLVEGKT SKQIGKLLAI SPRTVDIYRA RLMKKYGAHT AVDLVQRLVN H
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