| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1150 |
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| Symbol | |
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| ID | 4037948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1260898 |
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| End bp | 1261929 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976532 |
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| Product | TRAP dicarboxylate transporter subunit DctP |
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| Protein accession | YP_583305 |
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| Protein GI | 94310095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.515964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC GTGCCCTGAT GCTGTCCGTT GCCGCTTCGA TCGCCGCCGC CGCGCTTGCG
CCGGCCGGTG CGATGGCGCA GACCTACAAG TCCGAATACA AGATGTCGCT GGTGCTCGGT
CCCGCATTCC CGTGGGGCAA GGGCGGCGAG ATCTGGGCAG ACCTGGTGCG TCAGCGCACC
AATGGCCGCA TCAACATCAA GCTGTATCCG GGCACGTCGC TGGTGGCTGG CGACCAGACG
CGCGAGTTCT CGGCGATTCG CCAGGGCGTG ATCGACATGG CCGTGGGCTC CACCATCAAC
TGGTCCCCGC AGGTCAAGGA ACTGAACCTG TTCTCGCTCC CGTTCCTGAT GCCCGACTAC
AAGGCGCTGG ACTCGTTGAC CCAGGGCGAT GTGGGCAAGT CGATCTTCGC CACGCTGGAG
AAGGCGGGCG TGGTGCCGCT GGCCTGGGGC GAGAACGGTT TCCGCGAGGT CTCGAACTCG
AAGCACGAGA TCCGCAAGCC GGAAGACCTC AAGGGTCTGA AGCTGCGTGT GGTGGGTTCG
CCGTTGTACA TCGAGACGTT CAACGCGCTG GGCGCCAACC CCACGCAGAT GAGCTGGGCC
GATGCGCAGC CGGCCATGGC CTCCGGCGCC GTGGATGGCC AGGAGAACCC GCAGAGCGTG
TTCGCCGCTG CCAAGCTCTA CACGGTGGGT CAGAAGTTCG TGACGACCTG GGGCTACGTG
GCCGACCCGC TGATCTTCGT GGTCAACAAG CAGATCTGGG AAAGCTGGAC GCCGGCTGAT
CGCGAGATCG TCAAGCAGGC CGCCATCGAC GCAGGCAAGC AGGAAATCGC GCTGGCCCGC
AAGGGGCTGA ACGAGGCGGG CGCGCCGGCA TGGAAAGACA TGGAGCAGCA CGGCGTGAAG
GTGACCAGCC TGACGCCGGC CGAGCACGAT GCCTTCCGCA AGGCCACCAC CAAGGTCTAC
GACAAGTGGA AGAAGCAGAT TGGCGCCGAT CTGGTGACCA AGGCCGAAGC GTCCATCGCC
AATCGCCGAT GA
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| Protein sequence | MKRRALMLSV AASIAAAALA PAGAMAQTYK SEYKMSLVLG PAFPWGKGGE IWADLVRQRT
NGRINIKLYP GTSLVAGDQT REFSAIRQGV IDMAVGSTIN WSPQVKELNL FSLPFLMPDY
KALDSLTQGD VGKSIFATLE KAGVVPLAWG ENGFREVSNS KHEIRKPEDL KGLKLRVVGS
PLYIETFNAL GANPTQMSWA DAQPAMASGA VDGQENPQSV FAAAKLYTVG QKFVTTWGYV
ADPLIFVVNK QIWESWTPAD REIVKQAAID AGKQEIALAR KGLNEAGAPA WKDMEQHGVK
VTSLTPAEHD AFRKATTKVY DKWKKQIGAD LVTKAEASIA NRR
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