| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1149 |
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| Symbol | |
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| ID | 4037947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1259559 |
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| End bp | 1260863 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976531 |
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| Product | TRAP dicarboxylate transporter subunit DctM |
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| Protein accession | YP_583304 |
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| Protein GI | 94310094 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA TCGCCATCAT TCTGTTCGTG GTTTTCATTG GCCTGATGCT GCTGGGCGCG
CCAATTGGCG TGTCGCTGGG GCTGGGCGGT CTGGTCGCCA TCGGCCTGTC GAACCTCGAT
ACGCAAATGT TCGGCCTGCT GGCCGTGCCC CAGAACTTCT ATGCCGGTCT TGCCAAGTAC
CCGCTGCTGG CCATTCCCAT GTTCGTGCTG GTCGGTTCGA TCTTCGATCG TTCCGGCGTA
GCGCAACGAC TGGTCACGTT CGCCATCGCG ATCGTGGGCC GTGGTCCGGG CATGTTGCCG
CTGGTGGCCA TCCTCGTGGC GATGTTCCTG GGCGGCATCT CCGGCTCTGG TCCCGCGAAC
GCGGCCGCGG TAGGGGGCGT GATGATCGCG GCGATGTCGC GTGCGGGCTA TCCGGGCTCC
TACAGCGCCG CGGTGGTTGG CGCGGCGGCG GCTACGGACA TTCTGATCCC GCCGTCGGTG
GCGTTCATTA TCTACAGCGT GCTGGTGCCA GGCGCATCGG TGCCCGCGCT GTTCGCCGCC
GGCATGATCC CGGGCATCCT GGCCGGTGTG GCGTTGATCG TTCCGGCCGT CTGGCTGGCG
CGCAAGCACA ACATGGGGCA TATCGAAGCC GGCTTGCCGC GCCCGCCGTT CTGGAAGAGC
CTGCGCGAGG CCGCATGGGG CCTGGTGGCG CCGTTCCTGA TTCTGGGTGG CATGCGCGCG
GGCTGGTTCA CGCCGACCGA GGCCGCCGTC GTGGCCGTGG TCTACGGGTT GTTCGTCGGC
ATGGTGATCT ATCGCAGCAT TGGCGTGCGC GACCTGTTCA CGATTTTCCA GGAGGCGGCC
GAGACATCGG CGGTGATCCT GCTGGTGGTG GCGCTGGCCG GCATCTTCGC CTATGCGCTG
TCCACGCTCG GCGTAATCGA CCCGCTGGCC AATGCCATTG CGCATTCGGG GCTGGGCGAG
TACGGCGTGC TGGCGCTGAT CGTGCTGTTG CTGATGACCG TCGGCATGTT CCTGGACGGC
ATCTCGATCT TCCTGATCTT CGTGCCGCTG CTGCTCCCGA TCGCCACCGC GTTCCACTGG
AATCCGGTAT GGTTTGGCGT GGTGCTCACG CTCAAGGTGG CGCTGGGTCA GTTCACCCCG
CCACTGGCCG TGAACCTGAT GGTGTCGTGC CGCATCGCGC GCGTGCGCAT GGAAGAGACC
GTGCCATGGG TGATCTGGAT GCTGCTGGCG ATGTTCGTCG CCATGCTGAT GGTGCTGGCC
TATCCGCCGC TGGCCACCTG GCTGCCCGAC TACCTGGGCT ATTGA
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| Protein sequence | MTLIAIILFV VFIGLMLLGA PIGVSLGLGG LVAIGLSNLD TQMFGLLAVP QNFYAGLAKY
PLLAIPMFVL VGSIFDRSGV AQRLVTFAIA IVGRGPGMLP LVAILVAMFL GGISGSGPAN
AAAVGGVMIA AMSRAGYPGS YSAAVVGAAA ATDILIPPSV AFIIYSVLVP GASVPALFAA
GMIPGILAGV ALIVPAVWLA RKHNMGHIEA GLPRPPFWKS LREAAWGLVA PFLILGGMRA
GWFTPTEAAV VAVVYGLFVG MVIYRSIGVR DLFTIFQEAA ETSAVILLVV ALAGIFAYAL
STLGVIDPLA NAIAHSGLGE YGVLALIVLL LMTVGMFLDG ISIFLIFVPL LLPIATAFHW
NPVWFGVVLT LKVALGQFTP PLAVNLMVSC RIARVRMEET VPWVIWMLLA MFVAMLMVLA
YPPLATWLPD YLGY
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