Gene Rmet_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1145 
Symbol 
ID4037943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1253406 
End bp1255883 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content63% 
IMG OID637976527 
Productmolybdopterin guanine dinucleotide-containing S/N-oxide reductase 
Protein accessionYP_583300 
Protein GI94310090 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0259974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATG AATTTGGGAA GTCGGACACG AACATTTCTC GCCGCCGCTT TATCCAGGGC 
GCGCTGGCCG CGGGTACATT GGGTTCCACT GGGGCCACGC TACTGGCGTC GGGTGCGCGG
TCGGCGACGG CGGGCAGTCG CGAGGTCCTG ACTGGATCGC ACTGGGGGGC GTTTTACATG
CGTGTGGACG ATGGCCGGGT AACGGGCGTC CGGCCGTGGG AGAAGGACCC GAAGCCATCG
CATCAATTGC CCGGTGTGCT GGACTCGATG TACTCACCGA CGCGCATCCG CCATCCGATG
GTGCGCCGGG CCTGGTTGGA ACGTGGGCCC GGCGCCGATC CCGAGGGGCG CGGCAAGGGC
GATTTCGTTC GGGTCAGTTG GGAGAAGGCG CTCGATCTCG TGGCTGCGGA GCTGATGCGT
GTGCGAAAGA AACACGGGCC GACCTCGATC TTCGGTGGCT CCTATGGCTG GAAGAGTCCC
GGCAAGCTGC ACAATTGCCA GACTCTGCTG GCACGCGCGC TGACCGTCAA CGGCGGATTC
GTCAGCCGCA GCGGGGACTA CTCGACCGGC GCGGCACAGG TGATCCTGCC TTACGTGGTG
GGATCGATCG ACGTCTACGA GCAACCCACC GCGTGGCCGG TGCTGGCCGA GCACACGGAA
CTGATGGTTT TCTGGGCGGC CGATCCGATG GTCACGAACC AGATCGGTTG GCAGGTGCCT
GACCATGGCG CCTATCCTGG CATGGAAGCA TTGAAGAGCA AGGGCGTAAA GGTGATCTGC
ATCGATCCGG TGCGAACGGA CACCCGCCGC TATTTCGATG CCGAATGGCT GGCACCGCGC
CCGCATACCG ATGTCGCGAT GATGCTTGGG ATCGCGCATA CGCTGTACAC GGAAAAGCTG
CACGATGCGA AGTTCCTGGC CCGCTATACC ACTGGCTTCG ATCGGTTCGT TCCCTATCTG
ACGGGGGAGT CCGATGGTGT GGCCAAGAAT GCGGAGTGGG CGGCGGGCAT CTGCGAGATA
CCTGCGGACA CGATCCGCGA TCTCGCGCGC CGATTCGCTT CGAAGCGCAC GATGCTGGCG
GCAGGGTGGT CCATTCAGCG TCAGCATCAT GGAGAGCAGT CACACTGGAT GCTGGTGACG
CTGGCGTCGA TGCTGGGGCA GATCGGATTG CCCGGTGGGG GCTATGGCTT CACCTATCAC
TATGCCAATG GCGGCAGCCC CACGGCTACC GGGCCAGTGC TGCCGGGTAT CGTCGGCGGT
GCGAAGCCGC CGCCAGGATC GGAGTGGCTC GAAGCGGGTG GGACGGAGAC GATACCGGTC
TCGCGCATCG TCGAGATGCT CGAGAATCCC GGCAAGCCGT ACGACTTCAA TGGCAAGCGC
TCGAAGTACC CTGACATCCG GCTGGCCTAC TGGGTCGGTG GCAATCCGTT CATGCATCAT
CAGGATCGTA ACCGGATGAT CAAGGCGTGG CGCAAGCTCG ATACGTTCAT CGTGCAGGAC
TTCCAGTGGA CAGCCACCGC GCGTCATGCG GACATCGTGC TTCCGTGCAC TACGACCTAC
GAGCGCAATG ACATCGAAGG CATTGGCGAC TACTCGATGA GCCACATCCT GGCGATGCGC
AAGGTGGTGG ACCCACTGTT CGAGGCGCGC GACGACTACG ACATCTTCGC GGCGATCTGC
GAGCGCATGG GTACCGGCAA GGCGTTCACA GAGGGGCGCG ACGACATGGC CTGGATTCGC
ACGTTCTACG AAGCGGCGCG TGTTCAGGCA CGCGGTAAGC GCATGGAAAT GCCAGTGTTC
GATGTGTTCT GGAACAGCAA CAAGCCGCTG GCGTTCCCGA TCGGCGAGGA GGCGAAGGGT
TACATCCGGC ACAAGGAGTT CCGCGATGAC CCGCTGCTCA ATGCGCTCGG CACGCCCTCG
GGACGGATCG AGATCTACTC GTCGAACATC GCGCGCATGA AATACGACGA TTGCCCGCCT
CATCCCACCT GGATGGAGCC GCTGGAACGG CTGGGTGGGC CCACGACCAG GTATCCGTTG
CATATCGACA GCAGCCATCC CGGAAGCCGC CTGCATTCGC AGTTGTGCGG CACGGTGCTG
CGCGGGAGCT ATGCCATCAA GGGACGCGAA CCGTGCCTGA TGCATCCGGA AGATGCCAAG
ATCCGTGGGA TTGCCGATGG CGACATCGTA CGTGTGTTCA ATGATCGCGG GCAGATGCTG
GTAGGCGTCA GGCTTACCGA CGACATACGC CGTGGCGTTA TCCGCGTGTG CGAGGGCGGG
TGGTACGACC CTGCAGAGCC AGGCAAGCCC GGGACGCTGT GCCGATATGG CGACGTCAAC
AACCTGACGA CTGGCATCGG TACCTCGAAG CTGGCGCAAG GCAATTGCGG ACACACGGCC
ATGGCCGACG TCGAGAAGTA CCGGGGACCG GCACCTGCCG TCGAGGTGTT CAAAGCGCCG
CGCGGGGGCG ACGCCTGA
 
Protein sequence
MSNEFGKSDT NISRRRFIQG ALAAGTLGST GATLLASGAR SATAGSREVL TGSHWGAFYM 
RVDDGRVTGV RPWEKDPKPS HQLPGVLDSM YSPTRIRHPM VRRAWLERGP GADPEGRGKG
DFVRVSWEKA LDLVAAELMR VRKKHGPTSI FGGSYGWKSP GKLHNCQTLL ARALTVNGGF
VSRSGDYSTG AAQVILPYVV GSIDVYEQPT AWPVLAEHTE LMVFWAADPM VTNQIGWQVP
DHGAYPGMEA LKSKGVKVIC IDPVRTDTRR YFDAEWLAPR PHTDVAMMLG IAHTLYTEKL
HDAKFLARYT TGFDRFVPYL TGESDGVAKN AEWAAGICEI PADTIRDLAR RFASKRTMLA
AGWSIQRQHH GEQSHWMLVT LASMLGQIGL PGGGYGFTYH YANGGSPTAT GPVLPGIVGG
AKPPPGSEWL EAGGTETIPV SRIVEMLENP GKPYDFNGKR SKYPDIRLAY WVGGNPFMHH
QDRNRMIKAW RKLDTFIVQD FQWTATARHA DIVLPCTTTY ERNDIEGIGD YSMSHILAMR
KVVDPLFEAR DDYDIFAAIC ERMGTGKAFT EGRDDMAWIR TFYEAARVQA RGKRMEMPVF
DVFWNSNKPL AFPIGEEAKG YIRHKEFRDD PLLNALGTPS GRIEIYSSNI ARMKYDDCPP
HPTWMEPLER LGGPTTRYPL HIDSSHPGSR LHSQLCGTVL RGSYAIKGRE PCLMHPEDAK
IRGIADGDIV RVFNDRGQML VGVRLTDDIR RGVIRVCEGG WYDPAEPGKP GTLCRYGDVN
NLTTGIGTSK LAQGNCGHTA MADVEKYRGP APAVEVFKAP RGGDA