Gene Rmet_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1140 
Symbol 
ID4037938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1247502 
End bp1248608 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content68% 
IMG OID637976522 
ProductFAD dependent oxidoreductase 
Protein accessionYP_583295 
Protein GI94310085 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0603157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG TAGATTGCGT CGTGATCGGC GCTGGCGTGG TCGGTCTGGC CGTTGCGCGC 
GCGCTGGCGC CGCAGGGCCG CGAGGTCATC ATTCTCGAGG CCGAGAACGC GTTCGGCACG
ATTACGAGCG CGCGCAACAG CGAGGTGATC CACGCCGGCA TCTACTATCC CGCAGGTTCG
CTCAAGGCCG AACTGTGCGT GCGCGGCAAG ACGATGCTCT ACGACTACTG CGCCAGCCAC
CATGTCGCCC ATCAGCGCTG CGGCAAACTG ATCGTCGCCA CCAGCACCGC CCAGGTGGCC
ACGCTGGAAG GCATTCGCGC CAAGGCCGCC GCCAACGGCG TGCACGACAT GCAACTGCTG
ACGCGCGACG AAGCGCGGGC GATGGAACCC CAGCTCGAAT GCGAAGCCGC CCTGCTCTCA
CCTTCCACCG GCATCATCGA CAGCCACGGC CTGATGACCG CGCTGCTTGG CGATGCCGAG
CGGGCCGGCG CGATGCTGGC CGTGCAGTCG CCGGTGCTGT CGGGCGCGGT GACGCCGGAC
GGCATCCGGC TCGAGGTCGG TAGCGATGAT GGATCGACCG TGCTGCTCGC CCGCACGGTC
GTCAATTCGG CGGGGCTGAC CGCGCCAGAT CTGGCGCGCC GCATCGACGG CATTCCGCCC
GAACATATCC CGCCGCAGTA CTACGCCAAG GGCTGCTATT TCACGCTCGC CGGCCGCGCC
CCGTTCTCGC GGCTGATCTA CCCCGTGCCC GAGGCAGCCG GCCTGGGTGT ACATCTGACG
CTCGACATGG GTGGTCAGGC ACGCTTCGGT CCCAACGTGC GCTGGATCGA CGAGATCGAA
TACAGCGTGC CGCCGCACGA TGCCGACAGT TTCTACGACG AAGTCCGCCG CTACTGGCCC
GGCCTGGCCG ACGGCGCACT GCAGCCGGGT TATGCAGGCA TCCGGCCGAA GATCAGCGGC
CCGACGGAGG TTGCGGCCGA TTTCCGGATC GACGGGCCTC GGACGCATGG CGTGCCGGGG
CTGGTGAACC TGTTCGGCAT CGAGTCGCCC GGGCTGACTT CGTCGCTGGC GATCGCGGAA
CGCGTGGCGG AGTTGCTGGA GAACTGA
 
Protein sequence
MEQVDCVVIG AGVVGLAVAR ALAPQGREVI ILEAENAFGT ITSARNSEVI HAGIYYPAGS 
LKAELCVRGK TMLYDYCASH HVAHQRCGKL IVATSTAQVA TLEGIRAKAA ANGVHDMQLL
TRDEARAMEP QLECEAALLS PSTGIIDSHG LMTALLGDAE RAGAMLAVQS PVLSGAVTPD
GIRLEVGSDD GSTVLLARTV VNSAGLTAPD LARRIDGIPP EHIPPQYYAK GCYFTLAGRA
PFSRLIYPVP EAAGLGVHLT LDMGGQARFG PNVRWIDEIE YSVPPHDADS FYDEVRRYWP
GLADGALQPG YAGIRPKISG PTEVAADFRI DGPRTHGVPG LVNLFGIESP GLTSSLAIAE
RVAELLEN