Gene Rmet_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1139 
Symbol 
ID4037937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1246322 
End bp1247419 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content66% 
IMG OID637976521 
Productmajor facilitator transporter 
Protein accessionYP_583294 
Protein GI94310084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.173981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATCGC CGTACGTCAG CCTGTTCTTC GCCGACCGGG GCTTTTCGCC GGTGCAAATC 
GGCGTGCTGA TGGCCTGTTT CCAGCTATCC CGCATCGTGG GCCCGTACCT GTGGGGCTGG
CTCTCGGACG TGATGCACAC ACGCGTGAAG CTGTTGCGGC TGGCCGCGGT CACGGCATTG
CTGGCGTTTC TGGCCGTGCC CGGCATTCAG AGCTACGGCG GCATGATGGC GATGATGATA
GGGCTTAACC TGATCACGAG CGCCATGTCG CCGCTGGGTG ACGCGCTGAC GATCTCGACG
CTGCGCCGCC ACGGCGCGTT CGACCATCGC TACGGGCGTG TGCGGATGTT CGGCTCGATC
GGCTTTATCG CCGCGGTGCT GACGGGCGGC GCGTTGTTTG AGCGCTTTGG CATGCAGGCG
TTTCCGTGGC TGGCCAGCAC GATGCTGGCG CTGTTCGCGC TGGTGGTCTT CGGCATGCGC
GACGCGGCCG ACGAAGGCCC GCGCGCAGCA CCCCCACCTG CGCTGCCGCT GCTGCGGCGG
CCCGATGTGG CCTGGTTTTT CGCATCGGCC TTCCTGATGA TGTTCGCCCA CGCGGCGCTC
TACGTCTTCT ACTCGCTCTA TCTGGAGCAG CTTGGCTACA GCAAGTTTGC GATTGGCGTG
ATGTGGACCA TCGGCGTGGT GGCCGAGATC GTGTTCTTCT TCTATCAGGG CAAGCTGTTC
GGCGCGCTGG CGCTGCGCAC GATTCTGGCA GGCACATTCG TGCTGGCCGC GCTGCGTTTC
GGCATGACCG GCTACTTCGC GCAGTACGCC TGGCTGATTG CGCTAGTGCA GATCCTGCAC
GCAGCCACCT TTGGCGCGCA CCACAGTGCC AGCCTCAAGC GCCTGCAACG CTGGTTCGCC
GGCCCGCTGC AGGGGCGGGG GCAGGCGCTG TACACAGGGA TTTCCTACGG CGTGGGCGGC
ACGCTCGGCG GCCTGGCGAT GGGCTGGACG TGGAAGACGC TCGCGCCGAT GCACACGTTC
GGGCTAGCGG CGCTGGCGGC GCTGATTGGC GCGGGATGCG CCGTGATGAG TTTTCGCGGG
GAGCCCGAAC GGGCCTGA
 
Protein sequence
MISPYVSLFF ADRGFSPVQI GVLMACFQLS RIVGPYLWGW LSDVMHTRVK LLRLAAVTAL 
LAFLAVPGIQ SYGGMMAMMI GLNLITSAMS PLGDALTIST LRRHGAFDHR YGRVRMFGSI
GFIAAVLTGG ALFERFGMQA FPWLASTMLA LFALVVFGMR DAADEGPRAA PPPALPLLRR
PDVAWFFASA FLMMFAHAAL YVFYSLYLEQ LGYSKFAIGV MWTIGVVAEI VFFFYQGKLF
GALALRTILA GTFVLAALRF GMTGYFAQYA WLIALVQILH AATFGAHHSA SLKRLQRWFA
GPLQGRGQAL YTGISYGVGG TLGGLAMGWT WKTLAPMHTF GLAALAALIG AGCAVMSFRG
EPERA