Gene Rmet_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1131 
Symbol 
ID4037929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1237665 
End bp1239008 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content65% 
IMG OID637976513 
ProducttRNA-processing RNAse BN 
Protein accessionYP_583286 
Protein GI94310076 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0120336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG TACGCATCGC CCGCCTGCGC AGGGAGTGGA ACCTGCAGAA AGTGCGTGCA 
CTTGCCCGCT ATGCGTTGCG CCGCGCCGGC GAGGACCGCC TGCCCCAGGT ATCGGCCAGC
CTGACATTCA CGACCGTGCT GGCCGTGGTA CCGGTGCTGA CCGTTGCTTT CGCGCTGCTT
GCCGCGTTTC CGGTGTTCCG GGATTTCCGC GGCCAGATCG AGATGTTCCT GTTCCAGAAC
CTGATTCCGG GCGGCAATAT CAGCGATTCG GTGTCGCGTT ATATCGGACA GTTCTCCCGC
AGCGCGCGTG GCCTGACGGC ATTGGGCCTG GCCGGGCTGA TGGTGACTTC CGTGCTGACA
ATGCTGACCG TCGAGGACGC GCTCAACGCG ATCTGGCGCG TCAGGCGGCG CCGGCCATTC
GCGCAACGGG TGCTGGTGTT CTGGGCCGTG CTGACGCTCG GGCCGGTGCT GATCGGCGCG
AGCCTTTCCG TCAGTTCGTA CCTGATGTCG GTCTCGATGG GTTACGTCGG CAACCTGCCG
TTTGGCGTCG GGTTCGTGAT CAGTCTGGTG CCGGTGCTGC TCTCTGCGCT CGCCTTTGCC
TTTCTTTACA TGGCGGTGCC CAATGCCTAC GTGGAGTGGC GCGATGCGAT TGTCGCCGGC
ATCGTGGCGG CCGTCGCTTT TGAAGTGGCC AAGCGCGGCT TCGGCTACTT CATCACCCAT
ATCCCCACCT ACACGGCCGT GTATGGCACC TTCGCCGTGC TGCCGCTGTT CCTGCTGTGG
ATGTATGTGA GCTGGCTGGT GACGCTGCTC GGCGCGACGA TTGCGGCCAA CCTGCCGGTG
ATCCGCGAGG GACACTGGCG TCGGCGGACG TTCGCGGGTA GCGAATTCTT CGACGCGCTT
GGCATCCTGT ATCTGCTGTA CCGCGCGCGG GACGAGGTGC CGCGCAGCGT TGGCGAACTG
GATATGGGTC GCAAGCTGCG GATGGAGGCC GACTATCTCT CCGGCCTGCT GACCAAGCTC
AAGGCCATGC ATCTGGTGGG CAAGCTCCAG CAGGATCGGG GTCAGGCGCA TTGGGCGTTG
CTCTGCGATC CGTCGCAGGT CACGCTGCGC ACGCTGCACG ACAGGCTGGT GCTGAACATG
GCACGCCTGC CGCGCACGGC GCTGGCCCAA CAGATGCAGG GGGCGGAGGC ATTGCGGTCG
ATCCTGGAGA ATCCGCAACT CGAGCAGACG CTGGACGCGG TGTTCCGCCA GCAGACGGCC
GGGGCGGCCG CGAACGAGGA AACGGGCCAC CGCGATCGCA AGGTGGTGGA AGTCGTCCCG
CCGGGCTGGC ACGGACAGGT CTAG
 
Protein sequence
MTAVRIARLR REWNLQKVRA LARYALRRAG EDRLPQVSAS LTFTTVLAVV PVLTVAFALL 
AAFPVFRDFR GQIEMFLFQN LIPGGNISDS VSRYIGQFSR SARGLTALGL AGLMVTSVLT
MLTVEDALNA IWRVRRRRPF AQRVLVFWAV LTLGPVLIGA SLSVSSYLMS VSMGYVGNLP
FGVGFVISLV PVLLSALAFA FLYMAVPNAY VEWRDAIVAG IVAAVAFEVA KRGFGYFITH
IPTYTAVYGT FAVLPLFLLW MYVSWLVTLL GATIAANLPV IREGHWRRRT FAGSEFFDAL
GILYLLYRAR DEVPRSVGEL DMGRKLRMEA DYLSGLLTKL KAMHLVGKLQ QDRGQAHWAL
LCDPSQVTLR TLHDRLVLNM ARLPRTALAQ QMQGAEALRS ILENPQLEQT LDAVFRQQTA
GAAANEETGH RDRKVVEVVP PGWHGQV