Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1131 |
Symbol | |
ID | 4037929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1237665 |
End bp | 1239008 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976513 |
Product | tRNA-processing RNAse BN |
Protein accession | YP_583286 |
Protein GI | 94310076 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0120336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTG TACGCATCGC CCGCCTGCGC AGGGAGTGGA ACCTGCAGAA AGTGCGTGCA CTTGCCCGCT ATGCGTTGCG CCGCGCCGGC GAGGACCGCC TGCCCCAGGT ATCGGCCAGC CTGACATTCA CGACCGTGCT GGCCGTGGTA CCGGTGCTGA CCGTTGCTTT CGCGCTGCTT GCCGCGTTTC CGGTGTTCCG GGATTTCCGC GGCCAGATCG AGATGTTCCT GTTCCAGAAC CTGATTCCGG GCGGCAATAT CAGCGATTCG GTGTCGCGTT ATATCGGACA GTTCTCCCGC AGCGCGCGTG GCCTGACGGC ATTGGGCCTG GCCGGGCTGA TGGTGACTTC CGTGCTGACA ATGCTGACCG TCGAGGACGC GCTCAACGCG ATCTGGCGCG TCAGGCGGCG CCGGCCATTC GCGCAACGGG TGCTGGTGTT CTGGGCCGTG CTGACGCTCG GGCCGGTGCT GATCGGCGCG AGCCTTTCCG TCAGTTCGTA CCTGATGTCG GTCTCGATGG GTTACGTCGG CAACCTGCCG TTTGGCGTCG GGTTCGTGAT CAGTCTGGTG CCGGTGCTGC TCTCTGCGCT CGCCTTTGCC TTTCTTTACA TGGCGGTGCC CAATGCCTAC GTGGAGTGGC GCGATGCGAT TGTCGCCGGC ATCGTGGCGG CCGTCGCTTT TGAAGTGGCC AAGCGCGGCT TCGGCTACTT CATCACCCAT ATCCCCACCT ACACGGCCGT GTATGGCACC TTCGCCGTGC TGCCGCTGTT CCTGCTGTGG ATGTATGTGA GCTGGCTGGT GACGCTGCTC GGCGCGACGA TTGCGGCCAA CCTGCCGGTG ATCCGCGAGG GACACTGGCG TCGGCGGACG TTCGCGGGTA GCGAATTCTT CGACGCGCTT GGCATCCTGT ATCTGCTGTA CCGCGCGCGG GACGAGGTGC CGCGCAGCGT TGGCGAACTG GATATGGGTC GCAAGCTGCG GATGGAGGCC GACTATCTCT CCGGCCTGCT GACCAAGCTC AAGGCCATGC ATCTGGTGGG CAAGCTCCAG CAGGATCGGG GTCAGGCGCA TTGGGCGTTG CTCTGCGATC CGTCGCAGGT CACGCTGCGC ACGCTGCACG ACAGGCTGGT GCTGAACATG GCACGCCTGC CGCGCACGGC GCTGGCCCAA CAGATGCAGG GGGCGGAGGC ATTGCGGTCG ATCCTGGAGA ATCCGCAACT CGAGCAGACG CTGGACGCGG TGTTCCGCCA GCAGACGGCC GGGGCGGCCG CGAACGAGGA AACGGGCCAC CGCGATCGCA AGGTGGTGGA AGTCGTCCCG CCGGGCTGGC ACGGACAGGT CTAG
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Protein sequence | MTAVRIARLR REWNLQKVRA LARYALRRAG EDRLPQVSAS LTFTTVLAVV PVLTVAFALL AAFPVFRDFR GQIEMFLFQN LIPGGNISDS VSRYIGQFSR SARGLTALGL AGLMVTSVLT MLTVEDALNA IWRVRRRRPF AQRVLVFWAV LTLGPVLIGA SLSVSSYLMS VSMGYVGNLP FGVGFVISLV PVLLSALAFA FLYMAVPNAY VEWRDAIVAG IVAAVAFEVA KRGFGYFITH IPTYTAVYGT FAVLPLFLLW MYVSWLVTLL GATIAANLPV IREGHWRRRT FAGSEFFDAL GILYLLYRAR DEVPRSVGEL DMGRKLRMEA DYLSGLLTKL KAMHLVGKLQ QDRGQAHWAL LCDPSQVTLR TLHDRLVLNM ARLPRTALAQ QMQGAEALRS ILENPQLEQT LDAVFRQQTA GAAANEETGH RDRKVVEVVP PGWHGQV
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